Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00204 ATGGAGGCTGTAAACATTGTCTCGAGCAATAGCGATGTGAACAATCATTGGCTTAGGGACATTATCATCAGGATTAGAGCAATGAGAAGTTGGAATTGGGCTGTCACATTTGTTCATGTCAATAGAGAACAGAATCATGTTGCAGATGCTTTAGCAAAGCTTGGAGTGCAAGAAGGGATCCCCATGCGCATCTGGAGGGGCTGCCACTCTCACTCTTGGCTGCAGATCTCTCCGGTGCTTGTATCTTGTCGAGTTGTGAAGATGTTCACATCAAGGAAGAAAATCCACAAGGATAAGGATGCTGAGCCAACTGAGTTTGAGGAGTCAGTTGGGCAGGCATTGTTTGATCTGGAAAATACTAACCAGGAGCTTAAAAGTGATCTGAAGGATCTTTACATAAATTCAGCAGTACAAATTGATGTTTCTGGGAACCGCAAGGCTGTTGTTATCCATGTCCCTTACAGATTAAGGAAAGGTTTCCGCAAGATTCATGTTAGGCTTGTCAGGGAGCTTGAGAAGAAGTTTAGTGGGAAGGATGTAATCTTGATTGCCACCAGGAGGATATTGAGGCCACCAAAGAAAGGTTCTGCTGTTCAGCGTCCCCGCAGCCGTACCCTCACTGCTGTTCATGAAGCAATGCTGGAGGATATTGTATTGCCTGCTGAGATCGTTGGGAAGCGTGTGAGGTATAGAATTGACGGATCCAAGATTATGAAGGTTTTCTTGGACCCAAAGGAGCGAAACAACACTGAGTACAAGTTGGAGACTTTTGCCGCAGTGTATAGGAAGCTGTCGGGCAAAGATGTTGTGTTTGAGTATCCCATCACAGAGGCTTAG 837 0.454 MEAVNIVSSNSDVNNHWLRDIIIRIRAMRSWNWAVTFVHVNREQNHVADALAKLGVQEGIPMRIWRGCHSHSWLQISPVLVSCRVVKMFTSRKKIHKDKDAEPTEFEESVGQALFDLENTNQELKSDLKDLYINSAVQIDVSGNRKAVVIHVPYRLRKGFRKIHVRLVRELEKKFSGKDVILIATRRILRPPKKGSAVQRPRSRTLTAVHEAMLEDIVLPAEIVGKRVRYRIDGSKIMKVFLDPKERNNTEYKLETFAAVYRKLSGKDVVFEYPITEA* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00204 278 Pfam Reverse transcriptase-like 3 54 IPR002156 GO:0003676|GO:0004523
Rops2g00204 278 Coils Coil 114 134 - -
Rops2g00204 278 ProSitePatterns Ribosomal protein S7e signature. 166 179 IPR000554 GO:0003735|GO:0005840|GO:0006412
Rops2g00204 278 Gene3D - 1 60 IPR036397 GO:0003676
Rops2g00204 278 Pfam Ribosomal protein S7e 94 273 IPR000554 GO:0003735|GO:0005840|GO:0006412
Rops2g00204 278 PANTHER 40S RIBOSOMAL PROTEIN S7 88 277 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00204 Rops-Chr2 3082303 3087732 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00204 88 278 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 79.581 2.16e-114 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00204 K02993 - gmx:100499757 366.311