Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00192 ATGGCGGCTAAACGGTTTTTGGATGATTCTGATCAAGATGCAGACAAGCCAAACGACAAACGAATGAGAACTACAAGACCTTCTTTTGCTTCGGTAATAGGAGAAGTCGTTATGGTGAAAAACTTGCAGAACCTTTTCTCAGGCTTGGAACCTTTGCTTAGAAGAGTGGTGAATGAAGAGATGGAGAAAGCCATGAGACGTTGTCTTCCACGTTCAATAACAAGGTCCCCTTCATTGAGAATCCAAGCATTACAGCAACCATCAAGCTTTCAACTCATGTTCAACAAAAAGCTTTCACTCCCTATATTCACTGGTAGCAGGATACTTGACATGGATGGGGACACAATCCAAGTGGTTCTTGTTGACAAAAGTGGTGATCAAATGGTTCCCACAAGTCTCCCTCATCCTATAAAGCTAGAAATTGTGGTTCTTGATGGAGATTTCCCTCCTGGTGATAAGGAGTCATGGACTAGTGAGGAATTCAATAGCCACATAGTGAAGGAGAGAACAGGCAAGAGGCCATTGCTTACTGGAGAATTGAATCTCACCATGAGGGATGGGATTGCACCAATTGGAGACATTGAGTTCACTGACAATTCTAGCTGGATACGTAGCAGGAAGTTCAGAGTTGCTGTGAGAGTGGCACCAGGGAGTAATCTAAGTGTACGAATTCGTGAAGGCATGACTGATCCTTTCATCGTTAAGGATCATCGTGGAGAATTGTACAAGAAACATCACCCACCAATGCTCAATGATGAGGTGTGGCGCCTAGAGAAGATTGGGAAAGATGGAGCTTTCCACAAAAAATTGTCCACAGAGGGGATTAACACAGTGCAAGACTTTCTCAAGTTGTCCGTTGTTGATCCTCTTAGGCTCAGAAAGATTTTAGGCATTGGGATGTCAGAGAAAATGTGGGATGTTACAATCAAACATGCAAAGACTTGCAACATGGGTAACAAACTCTACGTTTACCGTGGCACCCATTTTACTATCTTTCTAAATGCCATATGCCAATTGGTTAGAGCTGATATCAATGGTCAAAGCTTTCCCGGAAGAGAGCTGAGCAACATGAACAGGAGCTACATAGAGAAATTGGTGAGAGAAGCATTTGGTAGATGGAATGACTTGGAGGAAATTGATGGGGTTTTGAATGATAACGTTGCTTTGTTAACCCAAGGTGAAACTGTGGAGAAATTTCCAAACAATAATCAAGCCTTGACAATAGCATATGATCAGAACGACTATTTTGTTGATAATAAACCTACAGAGGCTTGCAACTATGTACCAAGCCATAATGCACAAACTGTGGGCAGCGAGTGGGGAATGAATGAAACATTTGCCACAGCATCGTTTGTGAATAGCATACCTTACAGCTTTTCAGAGTCACAATCAGATGGTGATATAACTCCTGGTTCAGGTTCAGTCATTGATGGTGGTTCAAGGTGGCATTAG 1452 0.4249 MAAKRFLDDSDQDADKPNDKRMRTTRPSFASVIGEVVMVKNLQNLFSGLEPLLRRVVNEEMEKAMRRCLPRSITRSPSLRIQALQQPSSFQLMFNKKLSLPIFTGSRILDMDGDTIQVVLVDKSGDQMVPTSLPHPIKLEIVVLDGDFPPGDKESWTSEEFNSHIVKERTGKRPLLTGELNLTMRDGIAPIGDIEFTDNSSWIRSRKFRVAVRVAPGSNLSVRIREGMTDPFIVKDHRGELYKKHHPPMLNDEVWRLEKIGKDGAFHKKLSTEGINTVQDFLKLSVVDPLRLRKILGIGMSEKMWDVTIKHAKTCNMGNKLYVYRGTHFTIFLNAICQLVRADINGQSFPGRELSNMNRSYIEKLVREAFGRWNDLEEIDGVLNDNVALLTQGETVEKFPNNNQALTIAYDQNDYFVDNKPTEACNYVPSHNAQTVGSEWGMNETFATASFVNSIPYSFSESQSDGDITPGSGSVIDGGSRWH* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00192 483 Pfam Calmodulin binding protein central domain 249 315 IPR046830 -
Rops2g00192 483 MobiDBLite consensus disorder prediction 460 483 - -
Rops2g00192 483 PANTHER OS02G0177800 PROTEIN 1 433 IPR012416 GO:0005516
Rops2g00192 483 MobiDBLite consensus disorder prediction 1 23 - -
Rops2g00192 483 MobiDBLite consensus disorder prediction 1 25 - -
Rops2g00192 483 Pfam Calmodulin binding protein C-terminal domain 320 379 IPR046829 -
Rops2g00192 483 Pfam Calmodulin binding protein-like N-terminal domain 90 237 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00192 Rops-Chr2 2922579 2926486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00192 3 381 Calmodulin-binding Proteins AT5G57580 50.260 4.50e-124 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00192 - - gmx:100802257 723.776