Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00164 ATGACCTGCAAAAAGAGGTGGAGAATGGCCTTGAATGCCATCATCTATTTCATCAAGGCTCTCTTTGTTATGTCCAAATCAAATTCGACCATTGATGTGCAGCCAGAGAATGAGCATGAGCATGAGCACGAGCATTCCTTGGAAGACAAACCCCCCCGCTTCCAGATGGTTGATGTTACCAAACTTGTCTCAGACATGGTAAGGGAGAAAAGGATGGAATGTTTGACCCAGTTTGGAGGTGTAAAAAAAGTAGCGGCACTTCTTCAAACTCACTTGAAGCATGGCATCATAGGTAACTATGGCATAAACATGGTTGAAAGACCCCCTGCCAAAGGTTTTGTTCCTTTCCTACTTGAAGCATTCAATGATACCAGGGTTCTTCTAAATTTGATAATGGCTGTGCCCTCCATCGGCTTTGGTATTAAGCAATATGGCTGGAAAGATGGATGGTATGATGGTGGGAGTAATATTTTGGCGGTTGTTTTGGGGGTTGTCATAGCAGCCGTGTTTAACTTTAAGCAGTATACACAGTTTGAGGAGCTTTTATCAAAGAGTAGTGGCACAAGGGTTGAAGTAGTGAGAGGTGGTCGACGCCAAACCATATCAATCTATGACGTGGTGGTTGGCGACATCGCCTGCTTGAAGATTGGTGATCAGATTCCAGCGGATGGGTTGTTCTTGAAAGGACATTCCTTGACGGTGGACGAGTCCAGTGTGACAGGTGAAAGGGATCATGTCCATGTCGATGGTGATAGAATCCCTTTCTTGCTCTCTGGAACAAAAGTGATAGATGGTTTTGCCAACATGCTTGTTACCTCTGTGGGTATGAACACTGCTTGGGGTGAGACGATGAGATCAGGTGCCCGAGACTCAGTTGTGCTGCTGACACCTTTGCAAGCACGTCTCAACAAGTTGACTTCTGATTTAGGGAAGGTGGGGTTGCTGGGAGCTGTTGTTGTTCTATTGGTTTCATTAATCCGATATTTCACAGGAAGCACCGGAGAATTCAACAGAAGCGAGACCAAGTTTGACGATGTAATGAACGCAATTATAAGAATTGTGGGTGCTTCCATCACTATTGTGGAGGTGGCTATTCCTGAGGGATTGCCTCTAGCTGTTACTCTGACTCTGGCTTATTCCATGAAGAAAATGATGAGAGATAATGGCATGATTCGGGAACTCTTTGCTTGTGAGAGAATAGGATCAGTAACAACAATCTGCACGGATAAAACAGGCATCCTTACATTAAACCAGATGGAGGTCGCAGAGGTTTGGCTGGGAGAACAAACAATAACAGAATATCGTCATTTGGCTCCAAATTTACTCAAATTATTGAAAGAAGGAATTGGTTTAAATACGAGTGGAAGCATTTACCAACCCCTACCCACTTCGCTTCCTGAAATATCTGGCAGTCCAACCGAAAGAGCACTACTTTCCTGGGCTGTGCTGGATTTGGGCATGAATATTGACGAATTGAAGCAACAATATGAAATAATTTATATGGAGAGCTTCAACTCTAAGAAGAAGAGAAGTGGGATTCTGACAAGGGAGAACAGGGGAAACAGAATCCATACACATTGGAAGGGAGCTGCTGATGTAATACTGGCAATGTGTTCAAACTATTATGATCAAACAGGAAAAACCATGATCATAGATGCTGAAAAGAGAGTTCAAACTGAGAACATTATCAGAGGTATTGCAAGCAAAAGCTTGCGATGCATTGCCTTTGCCCAAAAGGGCTCCACAGAGGATGATGGACAGGCGTATGAAAAGCCTGAAGTGACAGGACTAGTATTGTTAGCTATACTTGGATTGGAGAAACCTTGTAGGCCGGGAGTTGAAGCAGCTGTTGAAGATTGCAAGAACGCCGGAGTGAAGATCAAGATGATTACAGGAGATAATGTGCTTACTGCAAAGGCCACAGCCTCTAAATGTGGGATTCTTGCCCCCGATGAAGATCTGGATGAAGAAGCAGTGATTGAAGGTCGTCAGTTCAGAAACTACTCAGATGAGGAAAGAATGGATAAGATTGACAAAATACAAGTCATGGCGAGATCATCTCCAGATGACAAGCTTCTAATGGTTCGATGTTTAAAACAGAAGGGTCATGTGGTAGCAGTTACAGGTGATGGCACAAATGATGCTCCTGCACTGGAAGAGGCAGATGTTGGACTTTCTATGGGAATACAAGGAACTGAAGTGGCAAAGCAGAGCTCAGATATTGTTATACTGGATGACAATTTCATTTCTGTGGTAACATTACTATGGCGGGGAAGGTGTGTATGCACTAACATTCAAAAGTTCATTCAATTCCAACTAACACTTAATATTGCTGCAGTTGTCATCAACTTTGTAGCTGCAGTTTCTTCTGGTAAAGTCCCACTAACAAACCTCCAGCTATTGTGGGTAAACCTGGTAATGGTTGCTCTTGGAGCTTTAGTCTTGGCCACTGAACAACCCACTTTTGATCTCAGGGAGATGCCACTTGCGGGACGATTTGAGCCACTTATAACTAAAGTTATGTGGGGAAACATCATAGCACAGGCATTGTATCAAGTGACTGTGGTATTGATTTTACTATTCAAGGGAAGATCTATGTTTCATGTCAACGAAGAGGTGAAGGATACCCTTATTTTTAACGTTGTGGTCTTCTGCCAAGTCTTTAATGTCTGCGATGCAAGAAAGCTTGAGAAGAAGAACATCATCGAGGGACTCGGTAATAATAGGTTGTTCATATTAATAGTGGGCTTAACCTTGGCTGTTCAGCTAGTGATGGTTGAGTTTCTGAATAAGTTCGCCAATACTGAGAGATTGACATGGGAGCAATGGGGTATTTGCATTGGCATAGCAGCTTTGTCTTGGCCAATTGCTCTACTCTTCAAGTGTATCCTAGTTGTTGTTCTTGGCGAAACATAG 2916 0.4321 MTCKKRWRMALNAIIYFIKALFVMSKSNSTIDVQPENEHEHEHEHSLEDKPPRFQMVDVTKLVSDMVREKRMECLTQFGGVKKVAALLQTHLKHGIIGNYGINMVERPPAKGFVPFLLEAFNDTRVLLNLIMAVPSIGFGIKQYGWKDGWYDGGSNILAVVLGVVIAAVFNFKQYTQFEELLSKSSGTRVEVVRGGRRQTISIYDVVVGDIACLKIGDQIPADGLFLKGHSLTVDESSVTGERDHVHVDGDRIPFLLSGTKVIDGFANMLVTSVGMNTAWGETMRSGARDSVVLLTPLQARLNKLTSDLGKVGLLGAVVVLLVSLIRYFTGSTGEFNRSETKFDDVMNAIIRIVGASITIVEVAIPEGLPLAVTLTLAYSMKKMMRDNGMIRELFACERIGSVTTICTDKTGILTLNQMEVAEVWLGEQTITEYRHLAPNLLKLLKEGIGLNTSGSIYQPLPTSLPEISGSPTERALLSWAVLDLGMNIDELKQQYEIIYMESFNSKKKRSGILTRENRGNRIHTHWKGAADVILAMCSNYYDQTGKTMIIDAEKRVQTENIIRGIASKSLRCIAFAQKGSTEDDGQAYEKPEVTGLVLLAILGLEKPCRPGVEAAVEDCKNAGVKIKMITGDNVLTAKATASKCGILAPDEDLDEEAVIEGRQFRNYSDEERMDKIDKIQVMARSSPDDKLLMVRCLKQKGHVVAVTGDGTNDAPALEEADVGLSMGIQGTEVAKQSSDIVILDDNFISVVTLLWRGRCVCTNIQKFIQFQLTLNIAAVVINFVAAVSSGKVPLTNLQLLWVNLVMVALGALVLATEQPTFDLREMPLAGRFEPLITKVMWGNIIAQALYQVTVVLILLFKGRSMFHVNEEVKDTLIFNVVVFCQVFNVCDARKLEKKNIIEGLGNNRLFILIVGLTLAVQLVMVEFLNKFANTERLTWEQWGICIGIAALSWPIALLFKCILVVVLGET* 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00164 971 PANTHER CATION TRANSPORTING ATPASE 54 964 - -
Rops2g00164 971 FunFam Calcium-transporting ATPase 165 287 - -
Rops2g00164 971 FunFam Calcium-transporting ATPase 725 967 - -
Rops2g00164 971 Gene3D - 119 962 - -
Rops2g00164 971 SUPERFAMILY HAD-like 405 812 IPR036412 -
Rops2g00164 971 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 414 613 IPR023299 GO:0000166
Rops2g00164 971 SUPERFAMILY Calcium ATPase, transduction domain A 189 285 IPR008250 -
Rops2g00164 971 Gene3D - 417 608 IPR023299 GO:0000166
Rops2g00164 971 PRINTS H+-transporting ATPase (proton pump) signature 740 765 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops2g00164 971 PRINTS H+-transporting ATPase (proton pump) signature 559 577 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops2g00164 971 PRINTS H+-transporting ATPase (proton pump) signature 708 724 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops2g00164 971 NCBIfam HAD-IC family P-type ATPase 679 788 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops2g00164 971 PRINTS P-type cation-transporting ATPase superfamily signature 601 612 - -
Rops2g00164 971 PRINTS P-type cation-transporting ATPase superfamily signature 235 249 - -
Rops2g00164 971 PRINTS P-type cation-transporting ATPase superfamily signature 623 633 - -
Rops2g00164 971 PRINTS P-type cation-transporting ATPase superfamily signature 732 744 - -
Rops2g00164 971 PRINTS P-type cation-transporting ATPase superfamily signature 407 421 - -
Rops2g00164 971 PRINTS P-type cation-transporting ATPase superfamily signature 708 727 - -
Rops2g00164 971 FunFam Calcium-transporting ATPase 603 753 - -
Rops2g00164 971 Pfam haloacid dehalogenase-like hydrolase 403 722 - -
Rops2g00164 971 Pfam E1-E2 ATPase 188 386 - -
Rops2g00164 971 Gene3D - 404 753 IPR023214 -
Rops2g00164 971 NCBIfam calcium-translocating P-type ATPase, PMCA-type 56 963 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Rops2g00164 971 SUPERFAMILY Calcium ATPase, transmembrane domain M 79 967 IPR023298 -
Rops2g00164 971 Pfam Cation transporting ATPase, C-terminus 793 962 IPR006068 -
Rops2g00164 971 Gene3D - 99 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00164 Rops-Chr2 2389626 2392541 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00164 3 965 Primary Pumps ATPases AT3G63380 55.903 0.0 1039
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00164 K01537 - gmx:100784119 1236.09