Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00162 ATGTTTGATGTCAACGAAGAGGTGAGGGATACCCTAATTTTTAATGTGGTTGTCTTCTGCCAAGTCTTTAATGACTTGAATGCAAGGAAGCCTGAGGTAAAGAACATCTTGGAGGGACTAGCTAATAATAGGTTGTTCATAGTAATAGTGGGCTTAACGGTGGCTGTTCAGCTAGTGATGGTTGAGTTTCTGAATAAGATCGCCAATGCTGAGAGATTGACATGGGAGCAATGGGGTATTTGCATTGGCATAGCAGCTTTGTCTTGGCCTGCTGGTCTGCTCGTAAAGTGTCCTAGTTGTTCTTGCCAAGCCGTAAACAAAGCATTTGGTCAAACCCAGGATAACCTTTCAGTCCATAATTCCATCTCTCGTTGGGAAAGAATAGAGCTTGCAATGCAGGCTACTCTATTGGATCCTAATCGTTCAGCTGGGCTAGAAATGGCTGCTTCACTGCGTGGACTCCTACCATCGAAGAAAACTAGCGTGGCCCAACATGTAAACTTTCTCCATGAAATGGGCTTACCCAATGATTGTTGGCTGACAAAAAGAGTTCCTTCGGTGTTTGAGGGTGAGGATGGGGGTGGGCACATGTTGGGTGTGGAAGAGGTGAACGACGATGAACAATAG 627 0.453 MFDVNEEVRDTLIFNVVVFCQVFNDLNARKPEVKNILEGLANNRLFIVIVGLTVAVQLVMVEFLNKIANAERLTWEQWGICIGIAALSWPAGLLVKCPSCSCQAVNKAFGQTQDNLSVHNSISRWERIELAMQATLLDPNRSAGLEMAASLRGLLPSKKTSVAQHVNFLHEMGLPNDCWLTKRVPSVFEGEDGGGHMLGVEEVNDDEQ* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00162 208 Gene3D - 2 103 - -
Rops2g00162 208 Pfam Cation transporting ATPase, C-terminus 8 96 IPR006068 -
Rops2g00162 208 PANTHER CATION TRANSPORTING ATPASE 3 98 - -
Rops2g00162 208 SUPERFAMILY Calcium ATPase, transmembrane domain M 9 97 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00162 Rops-Chr2 2353130 2357516 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00162 1 96 Primary Pumps ATPases AT3G63380 55.208 6.12e-32 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00162 K01537 - gmx:100784119 152.91