Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00161 ATGGCCTTGAATGCCATCATCTATTTCATCAAGGCTCTCTTTGTTATGTCCAAATCAAATTTGGCCACTCTACAGACAGAGCGTGAGCATTCCCCTGTCCACTTCCATGTTGATCCCAAACTGCTGGCAGACATGGTAAGGGAGAAAAGAATGGGATGTCTGAACCAATTTGGAGGCGTAGAAGAAGTAGCTGCACTTCTTCAAACTGACTCCAAGTATGGCATCATAGGTAACTTGATTGATCTTGATCACAGAAAGCATGTCTTCGGCGTCAACATGTTCCAGAGACCCCCTGCCAAAGGATTGCTTCCTTTCCTACTTGAAGCATTCAATGATGGCATGGTTTTTGTAAACTTGATAATGGCTATGGTATCCCTGGGTTTTGGTATCAAGCAACATGGATGGTATGATGGTGGAAGCATTGTTTTGGAGGTTGTCATCACTGCTTTGTGCAACCTTAAGCTGTATAGACACTTTGAGGAGCTTTCATCCGAGAGTTGGGACATAAGGGTTGAAGTGGTTAGAGGTGGTAGACGCCAAACCATATCAATCCATGATGTGGTGGTTGGTGACATCGCCTGCTTGAAGTCTGGTGACCAGATTCCAGCTGATGGTTTGTTCTTGGAAGGACATTCCTTGACGGTGGATGAGTCCAGTGTGACAGGGGAAAGCAACTTTGTGTTTGTCAATGGTAATAGAAACCCTTTCTTGATCTCTGGATCAAAGGTGGTAGATGGTTTTGCTTTCATGCTTGTTGTCTCTGTGGGTATGAATACTGCTTGGGGTGAGTTGATGAGTTCTGATCTGCAGACGCCTTTACAAGCAGGTCTTAACAAGTTGACTTCTGATATGAGGAAGGTTGGGTTGCTGGTAGCTGCTATTGTTCTATTAGTTTCATTGATCCAATATTTCACTGGAAGAGGCATCAGTGAGTTCCACGGAAGCAAGACCAAGTTTGTTGATGGAATGAATGCAATCGTGGAAATTGTTGGTGCTGCAGTCACTATTGTGGAGGTGGCAATTCCGGACGGGTTGCCTCTGGCTATTACTCTGACTTTGGCTTATTCCACGAAGAAAATGATGGGGGATAAAGGCATGATTCAAAAAATCGTTGCTTGTGAGACAATAGGATCAGCAACAACAATCTGCACTGATAAAACAGGAACTCTTACATCAAACGAGATGAAGGTCACAGAGGTTTGGATGGGAGAACAAACAATAGCAGAAGGTTGTCATTTGCCACCAAATTTACTGCAATTACTGAATGAAGGAATTGGTTTAAATATAACTGGAGGCATTTACCAATCCCAATCCTCTTCGCTTCCTGAAATATCTGGCAGTCCAACTGAGAAAGCGCTGCTTTCCTGGGCTGTGCTGGATTTGGGCATGAATATTGATGAATTGAAGCAACATTATGACATAATTTATATGGAGACCTTCAACTCTGAGAAGAAGAGAAGTGGGATTCTGACTAGGGACAACAGGGGAAACAGAATTCATACACACTGGAAGGGAGCTGCTGAGGTAATACTGGAATCGTGTTCAAATTATTATGATCAAACAGGGGAAATAATGATCATGGATGCTGAAAAAAGAATTCAAATTGAGAACATTATACGGGGTATGGCAGCGAAGAGCTTACGATGCATTGCCTTTGCCCACAAGAGCTACACAGAGGATGATGGACAGGTGTATGAAAAGCTTGAAGAGACGGGACTAATATTGTTGGGGATACTTGGATTACACAACCCTTGTAGGCCCGGAGTTGAAGCAGCAGTTGAATTCTGCAAGAACGCTGGGGTGAAGATCAAGATGATTACAGGAGATAATGTGCATACTGCAAGGGCCGTAGCCTCTGATTGTGGGATTCTTGCTCCTGATGAAGCATCGGATGTAGAAGCAGTGGTTGAAGGCTATCAATTCAGAAACTACTCAGATGAGGAAAGAATGGATAAGATTGACAAAATCCGAGTCATGGCAAGGTCATCTCCAGATGACAAGCTTCTGATGGTTCAATGTTTAAAGAAGAAGGGTCATGTGGTAGCAGTTACAGGTGATGGCACAAATGATGCACCTGCTCTAAAAGAGGCAGATATTGGAATTACCATGGGAATAGGAGGAACTGAAGTGGCAAAGCAGAGCTCAGATATTGTCATCCTGGATGACAATTTCGCTTCTGTGGTAACACTACTACGGTGGGGAAGGTGTGTATACGCTAACATTCAAAAGCTCATTGAGTCCCAACTTACACTTAATATTGCTGCAGTTGTCATCAACTTTGTTGCTGCAGTTTCTTCTGGTCAAGTCCCTCTAACAAACCTCCAGCAATTGTGGGTAAACCTGTTAATGGTTGCCCTGAGCTTTAGCCTTGGCCACTGA 2379 0.4363 MALNAIIYFIKALFVMSKSNLATLQTEREHSPVHFHVDPKLLADMVREKRMGCLNQFGGVEEVAALLQTDSKYGIIGNLIDLDHRKHVFGVNMFQRPPAKGLLPFLLEAFNDGMVFVNLIMAMVSLGFGIKQHGWYDGGSIVLEVVITALCNLKLYRHFEELSSESWDIRVEVVRGGRRQTISIHDVVVGDIACLKSGDQIPADGLFLEGHSLTVDESSVTGESNFVFVNGNRNPFLISGSKVVDGFAFMLVVSVGMNTAWGELMSSDLQTPLQAGLNKLTSDMRKVGLLVAAIVLLVSLIQYFTGRGISEFHGSKTKFVDGMNAIVEIVGAAVTIVEVAIPDGLPLAITLTLAYSTKKMMGDKGMIQKIVACETIGSATTICTDKTGTLTSNEMKVTEVWMGEQTIAEGCHLPPNLLQLLNEGIGLNITGGIYQSQSSSLPEISGSPTEKALLSWAVLDLGMNIDELKQHYDIIYMETFNSEKKRSGILTRDNRGNRIHTHWKGAAEVILESCSNYYDQTGEIMIMDAEKRIQIENIIRGMAAKSLRCIAFAHKSYTEDDGQVYEKLEETGLILLGILGLHNPCRPGVEAAVEFCKNAGVKIKMITGDNVHTARAVASDCGILAPDEASDVEAVVEGYQFRNYSDEERMDKIDKIRVMARSSPDDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADIGITMGIGGTEVAKQSSDIVILDDNFASVVTLLRWGRCVYANIQKLIESQLTLNIAAVVINFVAAVSSGQVPLTNLQQLWVNLLMVALSFSLGH* 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00161 792 Gene3D - 393 584 IPR023299 GO:0000166
Rops2g00161 792 PRINTS P-type cation-transporting ATPase superfamily signature 577 588 - -
Rops2g00161 792 PRINTS P-type cation-transporting ATPase superfamily signature 383 397 - -
Rops2g00161 792 PRINTS P-type cation-transporting ATPase superfamily signature 599 609 - -
Rops2g00161 792 PRINTS P-type cation-transporting ATPase superfamily signature 708 720 - -
Rops2g00161 792 PRINTS P-type cation-transporting ATPase superfamily signature 684 703 - -
Rops2g00161 792 PRINTS P-type cation-transporting ATPase superfamily signature 216 230 - -
Rops2g00161 792 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 389 589 IPR023299 GO:0000166
Rops2g00161 792 SFLD p-type atpase 368 737 IPR044492 -
Rops2g00161 792 SUPERFAMILY Calcium ATPase, transmembrane domain M 58 790 IPR023298 -
Rops2g00161 792 Gene3D - 380 729 IPR023214 -
Rops2g00161 792 NCBIfam calcium-translocating P-type ATPase, PMCA-type 52 786 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Rops2g00161 792 SUPERFAMILY Calcium ATPase, transduction domain A 169 265 IPR008250 -
Rops2g00161 792 SUPERFAMILY HAD-like 381 786 IPR036412 -
Rops2g00161 792 Gene3D - 84 267 - -
Rops2g00161 792 FunFam Calcium-transporting ATPase 577 729 - -
Rops2g00161 792 PANTHER CATION TRANSPORTING ATPASE 28 786 - -
Rops2g00161 792 NCBIfam HAD-IC family P-type ATPase 655 764 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops2g00161 792 Pfam haloacid dehalogenase-like hydrolase 380 698 - -
Rops2g00161 792 Pfam Cation transporter/ATPase, N-terminus 58 125 IPR004014 -
Rops2g00161 792 ProSitePatterns E1-E2 ATPases phosphorylation site. 385 391 IPR018303 -
Rops2g00161 792 PRINTS H+-transporting ATPase (proton pump) signature 535 553 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops2g00161 792 PRINTS H+-transporting ATPase (proton pump) signature 684 700 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops2g00161 792 PRINTS H+-transporting ATPase (proton pump) signature 716 741 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops2g00161 792 Pfam E1-E2 ATPase 170 361 - -
Rops2g00161 792 SFLD C1.7: P-type atpase like 368 737 - -
Rops2g00161 792 Gene3D - 108 783 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00161 Rops-Chr2 2350609 2352987 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00161 37 786 Primary Pumps ATPases AT3G63380 59.948 0.0 860
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00161 K01537 - gmx:100784119 973.77