Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00148 ATGCAGCCAGAAGCAGAGCATGAGTATGAAATACCCCTCCACATGCGATTTGCCAATGTTGATCGCATGCTGTTGGCAAACATGGTGAGGGAGAAGAGGGTGGAATCTCTGACCCTGTTTGGAGGGGTACAACGACTAGCTGCTGCTATTCTTAAAACGAACTTGAAGCATGGTATCGTAGGTGACTTGGCTGATCTTAATCACAGAAAGGATGTCTTTGGCATTAACTTGTTTCAGACACTGCCTGCCAAAGGATTCCATGTTTTCCTGCTTGAAGCATTTAAAGATGGCATGGTTTATGTAAACTTGATCATGGCTGTGCTCTCCCTGGTTTTTGGCATCAGGCAACATGGGTGGAAACATGGATGGAACGATGGTCTAAGCATTGCTGTGGCTGTTGTTTTGGGGGTTTTCATGTCTTCTGTGTGCAACCTTAAGCTGCATAGATGCTATGAGGAGCTTTCAGCAAAGAGGAGGGACAGAAGGGTTGAAGTTGTTAGAGGTGGTAGACCACAAACCATATCAATCTTTGATGTAGTGGTTGGTGACATCGCCTGCTTGAAGAGGGGTGATCGGATTCCAGCAGATGGGTTATTCTTTGAAGGACATTCCTTGAGGGTGGATGAGTCCTGTGTGACAAACGAAAGCATCCATTTGGTTGTCAATGGTGATAGTAACCCTTTCTTGCTCTCTGGCTCAAAGGTGGTGGATGGTTTTGCTTCCATGCTTGTTACCTCTGTTGGATTGAACACCGCTTGGGGTGAGATGATGAGTTCAAATACCCGAGACTCATTTGTGCATATTCCTTTTCAAGCACGTCTCAACCAGATGATTTCTGACATGAGGAAGGTTGGGTTCCTCGTTGCTGCTTTTGTGCTATTAGTTTCATTGATTCGATGTTTCAATGAATGCAACAGTGAATTCCATGGAAGCAAGACCGATTTTGATGATGTGATGAATGAGATTATGAAAATCCTTGACGCTGTAGTCACAATTGTGGAGGTGGCAATACCGGAGGGGTTGCATCTGGCTATTACCATGACTCTGGTTTTTTCCACGAAGAAAATAATGAGAGATAATGGCATGATTGGGAAACCCCTTACTTGTGAGACAATAGGATCAGCAACAACAGTTTGCACTGATAAAACAGGCACTCTTACATCAGACGATATGAAGGTCACAGAGGTTTGGGTGGGGGATCAAACAATGACAGAATGGGATCATTTGGTGCCAAATTCACTCCAATTACTCAAAGAAGGGATTGCTTTAAATACTACTGCAAGCATTTACCAATCCCAATCCACTTGGCTTCCTGAAATATCTGGCAACCCAACTGAGAAAGCACTACTTTCCTGGGTTGTGCTGGATTTGAGAATGAATGTTGATGAATTGAAGCGAAATTATGAAATAATTCATATGGAGACCTTCAACCCTGAGAAGAAGAGAAGTGGGATTCTGACGAGGGACAACAGGGGAAACAGAATTCATACACACTGGAAGGGAGGTGCTGAGGTAATTCTGGCAATGTGTTCGCATTATTATGATCAAACAAGGGAAATCATGATCATGGATGCTGAAAAAAGAGTTCAAATTGAGGACATCATCAGGGGTATGGCGGCCAAAAGCTTGAGATGCATTGGCTTTGCCCAAAAGAGCTGCCCAGGGGATGACGGACAAGTGTATGGAAAGCCTGAAGAGACAGGACTAGTATTGCTAGGGATACTTGGATTGAAGAACCCTTGTAGGCAAGGAGTTGAAGCAGCAGTTGAATTCTGCAAGAATGCTGGAGTGAAGATCAAGATGATTACAGGAGATAATGTGCATACTGCAAGGGCCATAGCCTCTGAATGTGGGATTCTTGCTCCTCATGAAGAATTGGATGAAGAAGCAGTGGTTGAAGGTTGTCAATTCAGAAACTACTCATATGACGAGAGAATGAATAAGACTGAAAAAGTCCAAGTGATGGCTAGATCATCTCCATTTGACAAGCTTCTGATGGTTCAATGTTTAAAGCAGCAGGGTCATGTGGTAGCAGTTACAGGTGATGGCACAAATGACGCACCTGCACTGCAAGAGGCCGATATTGGACTTTCCATGGGAATACAAGGAACTGAAGTGGCCAGGGAGAGCTCAGATATTGTCATACTGGATGACAATTTCACTTCTGTGGCAAGGGTATTGCGTTGGGGAAGGTGTGTGAACAATAACGTTCAAAAGTTCATTCAGTTCCAGCTTCCAGTTAATGTTGCTGCACTTGTCATCAACTTTGTGTCTGCAGTTTCTTCTGGTAAAGTCCCAATAACAAGCCTCCACCTATTATGGCTCAGCCTGATAATGGTTGGTCTTGGAGCTTTAGCCTTGGCCACTGAGAAACCCACATTTGATCGCATAGAGATGCCACCTGCAAGTGCAGGTAGATTTAAGCCACTTATAACTAAAGTCATGTGGCGAAACATCATAGCACAGGCATTGTATCTAGTGACTGTGGTATTTATTTTACAATTCAAGGGAAGATCAATGTTTGATGTCAACGAAGAGGTGACCAATATCCTTATTTTTAATGTTGTTGTCTTCTGCCAAGTCTTTAATGACTTTTATGCAAGGAAGCTTGAGAAGAAGAACATCTTCGAGGAACTTGCTAATCACAAGATGATGTTCATTGTAATAGTGGGCCTAACCTTGGCTGTTCAGCTAGTGTTGGTTGAGTTTCTGAATATGTTCGCCAATACTGGGAGATTGATATGGGAACAATGGAGTCTTTGCATTGGCATTGCAGCTCTGTCTTGGCCAATTGGTATGCTCGTAAAGTGTGTCATGGTTGTTCTTGATAAGCCATAG 2838 0.4345 MQPEAEHEYEIPLHMRFANVDRMLLANMVREKRVESLTLFGGVQRLAAAILKTNLKHGIVGDLADLNHRKDVFGINLFQTLPAKGFHVFLLEAFKDGMVYVNLIMAVLSLVFGIRQHGWKHGWNDGLSIAVAVVLGVFMSSVCNLKLHRCYEELSAKRRDRRVEVVRGGRPQTISIFDVVVGDIACLKRGDRIPADGLFFEGHSLRVDESCVTNESIHLVVNGDSNPFLLSGSKVVDGFASMLVTSVGLNTAWGEMMSSNTRDSFVHIPFQARLNQMISDMRKVGFLVAAFVLLVSLIRCFNECNSEFHGSKTDFDDVMNEIMKILDAVVTIVEVAIPEGLHLAITMTLVFSTKKIMRDNGMIGKPLTCETIGSATTVCTDKTGTLTSDDMKVTEVWVGDQTMTEWDHLVPNSLQLLKEGIALNTTASIYQSQSTWLPEISGNPTEKALLSWVVLDLRMNVDELKRNYEIIHMETFNPEKKRSGILTRDNRGNRIHTHWKGGAEVILAMCSHYYDQTREIMIMDAEKRVQIEDIIRGMAAKSLRCIGFAQKSCPGDDGQVYGKPEETGLVLLGILGLKNPCRQGVEAAVEFCKNAGVKIKMITGDNVHTARAIASECGILAPHEELDEEAVVEGCQFRNYSYDERMNKTEKVQVMARSSPFDKLLMVQCLKQQGHVVAVTGDGTNDAPALQEADIGLSMGIQGTEVARESSDIVILDDNFTSVARVLRWGRCVNNNVQKFIQFQLPVNVAALVINFVSAVSSGKVPITSLHLLWLSLIMVGLGALALATEKPTFDRIEMPPASAGRFKPLITKVMWRNIIAQALYLVTVVFILQFKGRSMFDVNEEVTNILIFNVVVFCQVFNDFYARKLEKKNIFEELANHKMMFIVIVGLTLAVQLVLVEFLNMFANTGRLIWEQWSLCIGIAALSWPIGMLVKCVMVVLDKP* 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00148 945 Gene3D - 389 580 IPR023299 GO:0000166
Rops2g00148 945 Gene3D - 92 937 - -
Rops2g00148 945 NCBIfam HAD-IC family P-type ATPase 650 761 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops2g00148 945 SFLD p-type atpase 367 733 IPR044492 -
Rops2g00148 945 PRINTS H+-transporting ATPase (proton pump) signature 680 696 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops2g00148 945 PRINTS H+-transporting ATPase (proton pump) signature 712 737 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops2g00148 945 PRINTS H+-transporting ATPase (proton pump) signature 531 549 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops2g00148 945 SFLD Haloacid Dehalogenase 367 733 - -
Rops2g00148 945 SUPERFAMILY Calcium ATPase, transmembrane domain M 48 940 IPR023298 -
Rops2g00148 945 Pfam E1-E2 ATPase 159 358 - -
Rops2g00148 945 SUPERFAMILY HAD-like 377 784 IPR036412 -
Rops2g00148 945 ProSitePatterns E1-E2 ATPases phosphorylation site. 381 387 IPR018303 -
Rops2g00148 945 NCBIfam calcium-translocating P-type ATPase, PMCA-type 34 938 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Rops2g00148 945 FunFam Calcium-transporting ATPase 697 942 - -
Rops2g00148 945 Pfam haloacid dehalogenase-like hydrolase 376 694 - -
Rops2g00148 945 SUPERFAMILY Calcium ATPase, transduction domain A 161 258 IPR008250 -
Rops2g00148 945 FunFam Calcium-transporting ATPase 574 725 - -
Rops2g00148 945 PRINTS P-type cation-transporting ATPase superfamily signature 595 605 - -
Rops2g00148 945 PRINTS P-type cation-transporting ATPase superfamily signature 680 699 - -
Rops2g00148 945 PRINTS P-type cation-transporting ATPase superfamily signature 573 584 - -
Rops2g00148 945 PRINTS P-type cation-transporting ATPase superfamily signature 379 393 - -
Rops2g00148 945 PRINTS P-type cation-transporting ATPase superfamily signature 704 716 - -
Rops2g00148 945 PRINTS P-type cation-transporting ATPase superfamily signature 208 222 - -
Rops2g00148 945 PANTHER CATION TRANSPORTING ATPASE 17 939 - -
Rops2g00148 945 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 385 585 IPR023299 GO:0000166
Rops2g00148 945 Gene3D - 66 261 - -
Rops2g00148 945 Gene3D - 376 725 IPR023214 -
Rops2g00148 945 Pfam Cation transporting ATPase, C-terminus 765 937 IPR006068 -
Rops2g00148 945 Pfam Cation transporter/ATPase, N-terminus 48 109 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00148 Rops-Chr2 2179580 2182417 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00148 20 940 Primary Pumps ATPases AT3G63380 55.065 0.0 966
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00148 K01537 - gmx:100784119 1171.38