Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00129 ATGGTGTCAAGATCGTATTCAAATCTACTGGAACTGGTCTCTGGTGAGTCTCCATCGTTTGGGAACATGAACAGGCGGATTCCAAGGATTATGACTGTGGCTGGGTTGATATCTGATGTTGATGATGACCCTTTGGAGAGTGTGTGCTCTGACCCTTCTTCTTCATCTGTCCCAAGAGACAGGATCATAATAGTGGCAAATCAGCTACCTATAAGGGCTCAGAGGAAGCAAGATGGTAACAAGAATTGGTTTTTCAGTTGGGATGAGAATTCACTTCTCCTCCAACTCAAAGATGGATTAGGAGATGATGATATTGAGGTTATTTATGTTGGATGCCTTCAGGAAGACGTGCATCCAAATGAACAAGACGAGGTTTCACAGATACTACTCGAGACCTTTAAATGCGTCCCTACTTTTCTCCCACCTGATCTGTTTTCCAGGTACTATCATGGCTTTTGCAAGCAACAGTTATGGCCACTGTTTCATTACATGTTACCTTTGTCACCAGACCTTGGTGGAAGGTTCAATAGATCACTGTGGCAAGCTTATGTCTCAGTCAATAAGATATTTGCAGATAGGATTATGGAAGTGATTAACCCGGAAGATGATTATGTGTGGATACATGATTATCATCTGATGGTGTTACCAACTTTCTTGAGGAAGAGGTTTAACAGAGTGAAACTTGGATTCTTCCTCCATAGCCCATTCCCTTCATCAGAAATATACAAGACATTGCCTATTAGGGAAGAGCTCTTGAGAGCCCTCCTCAATTCGGATTTGATTGGGTTCCACACTTTTGATTATGCAAGGCATTTTCTTTCCTGTTGTAGTAGGATGCTTGGTCTTACCTATGAATCCAAAAGGGGTTATATCGGGCTTGAGTATTATGGTAGGACCGTTAGCATCAAAATTCTTCCTGTTGGCATACACATGGGTCAGCTTCAGTCAGTTCTTGGCCTACCAAAGACTGAAGAAAAAGTTTCTGAGCTTATTAAACAGTTTCCTGATCGAGGCAAGGTTATGTTACTTGGGGTGGATGACATGGATATCTTTAAGGGAATAAGTTTGAAGCTATTGGCCATGGAGCAGCTTCTTATTCAGCACCCTGAGTGGCAGGGAAAGGTTGTATTGGTTCAGATAGCTAATCCTGCCAGGGGAAGAGGGAAAGATGTGAAGGAAGTGCAAGCTGAGACAGAGGCAACTGTGAAACGGATTAATGAAACATTTGGGAAGCCTGGTTATGATCCTGTCATTCTGATTGAGGAGCCACTAAGGTTTTATGAGAAAGTTGCCTATTATGTTGTTGCTGAGTGTTGTTTAGTAACTGCAGTCAGGGATGGAATGAATCTCATACCGTATGAATATATAATCAGTCGTCAAGGTAATGAAAAATTGGATAAAGTTCTGGGAATAGCTTCCTCCCCTAAGAAAAGCATGTTAGTTGTCTCTGAGTTCATTGGCTGTTCCCCATCTTTAAGTGGAGCAATCAGAGTGAACCCTTGGAATATTGATGCAGTAGCAGATGCAATGGACTCAGCCCTGGAAATGGCTGATTCCGAGAAACAGCTTAGGCATGAGAAGCATTACAGATATGTTAGTACTCATGATGTTGGGTACTGGGCTCGTAGCTTCTTGCAAGATTTGGAAAGGACTTGTAGTGATCATGTACGGCGAAGGTGGTGGGGCATTGGCTTTGGATTAAGTTTTAGAGTTGTAGCACTTGATCCAAACTTCAGGAAGCTCTCAATGGAGCACATAGTTTCAGCTTACAAGCGGACAACAACCAGGGCGATCCTTCTAGATTATGATGGTACACTAATGCCTCAGGCTTCCATTGCTAAAAGTCCAACCGATAATTCCATTAAAATGCTTAATAGTTTGTGTAGAGATAAGAACAACATGGTGTTTCTTGTCAGTGCCAAGAGCCGGAAGACACTTGAGGAATGGTTTTCTCCTTGTGAGAATCTGGGAATTGCGGCTGAGCATGGTTACTTTTTAAGACTGAATCGGGATGCAGAATGGGAAACCTGTGGACCTGCAGCAGACTGCAGTTGGAAACAAATTGCAGAGCCTGTAATGCAGCTTTATACTGAAACAACCGATGGATCCACCATTGAAGATAAGGAGACAGCACTTGTTTGGTGCTATGAGGATGCAGATCCAGATTTTGGATCATGCCAAGCTAAAGAACTTCTTAGTCATCTTGAAAGTGTCCTTGCAAATGAACCAGTAACTGTCAAGAGTGGCGGCCAGAACACAGTGGAGGTTAAACCACAGGGTGTGAGCAAGGGGCTTGTGGCCAAACGCCTACTTTCCACCATGCAAGAAAAGGGAATGTCACCTGATTTTGTTTTGTGTATAGGAGATGACCGGTCTGATGAAGACATGTTTGAGGTAATCATTAGTTCCATGGCTGGTCCTTCCATGGCACCCAGGGCTGAAGTATTTGCATGCACTGTTGGTCGAAAGCCCAGTAAGGCCAAGTACTATCTGGATGATACTACTGATATTGTGAGAATGGTGCAGGGTTTAGCCTGTGTTTCAGAGCAAACAGTTTTGTTTTAG 2565 0.4316 MVSRSYSNLLELVSGESPSFGNMNRRIPRIMTVAGLISDVDDDPLESVCSDPSSSSVPRDRIIIVANQLPIRAQRKQDGNKNWFFSWDENSLLLQLKDGLGDDDIEVIYVGCLQEDVHPNEQDEVSQILLETFKCVPTFLPPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDYVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLGLPKTEEKVSELIKQFPDRGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETEATVKRINETFGKPGYDPVILIEEPLRFYEKVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKVLGIASSPKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMADSEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCSDHVRRRWWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAILLDYDGTLMPQASIAKSPTDNSIKMLNSLCRDKNNMVFLVSAKSRKTLEEWFSPCENLGIAAEHGYFLRLNRDAEWETCGPAADCSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLSHLESVLANEPVTVKSGGQNTVEVKPQGVSKGLVAKRLLSTMQEKGMSPDFVLCIGDDRSDEDMFEVIISSMAGPSMAPRAEVFACTVGRKPSKAKYYLDDTTDIVRMVQGLACVSEQTVLF* 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00129 854 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 29 845 IPR001830 GO:0003824|GO:0005992
Rops2g00129 854 FunFam Trehalose-6-phosphate synthase 2 679 759 - -
Rops2g00129 854 NCBIfam HAD-IIB family hydrolase 598 800 IPR006379 -
Rops2g00129 854 CDD GT20_TPS 61 549 IPR001830 GO:0003824|GO:0005992
Rops2g00129 854 Gene3D - 728 852 IPR023214 -
Rops2g00129 854 Gene3D - 595 727 IPR023214 -
Rops2g00129 854 Gene3D Glycogen Phosphorylase B; 51 323 - -
Rops2g00129 854 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 54 315 - -
Rops2g00129 854 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 595 712 - -
Rops2g00129 854 Gene3D Glycogen Phosphorylase B; 324 534 - -
Rops2g00129 854 Pfam Trehalose-phosphatase 599 834 IPR003337 GO:0003824|GO:0005992
Rops2g00129 854 NCBIfam trehalose-phosphatase 595 844 IPR003337 GO:0003824|GO:0005992
Rops2g00129 854 CDD HAD_TPP 597 839 - -
Rops2g00129 854 FunFam Trehalose-6-phosphate synthase 10 726 853 - -
Rops2g00129 854 FunFam Alpha,alpha-trehalose-phosphate synthase 317 533 - -
Rops2g00129 854 Pfam Glycosyltransferase family 20 61 549 IPR001830 GO:0003824|GO:0005992
Rops2g00129 854 SUPERFAMILY HAD-like 596 844 IPR036412 -
Rops2g00129 854 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00129 Rops-Chr2 1990636 1994537 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00129 1 850 Trehalose Biosynthesis Gene Families AT1G68020 81.713 0.0 1476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00129 K16055 - cit:102609352 1553.5