Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00120 ATGGTGGGGCAGAATCTTTTGCCAAAGGAAAGGAGTAGAGATTGGATTAGGGCTCTTATGAATAGCAGCTCCGGTTATTGTGATGATCACCATGATCTTCGATCTAATGAGAAGAATGTTTTCTGTGTAGACTGTGCAGTTAGATTTTGTAGGCACTGTAAGGAAGCTCATTCCCTCCACAAAAGGTTTCAGATATACAAATATTCCTATCAGGATGTCTTTCGCCATACCGAGCTGCAGAAGTATTTTGACTGCTCAAAAATTCAGACTTACATATCTAATAATGAAAGGATTGTGCATCTCAAACCCCGGCCTTCAATCAATAAATCTAAATCTGCTGATCTATGCCCTGAGTCTAAATCCAAAGAAACCAACTTATCATTAAGACTGAAGTCGGGTGGTACATGTGAAGAATGTGGAAAACACTTGCAAGATGAGCGTAATCGCTTCTGCTCCATTACATGCAAGATCTCAGTGCTTCAAGTGGAGCCCCAAAACCAAGGTCAGAATCACCGTTCACAAAGGAGTTCAGTGGAACCCATCAACCATAATGCTAGATGCATCACTCCAAAACCTGAAGCTATTGACTTTAATATGAATGATAACCATAATTCAGAACCGGAGTCATCCATCTCTGAAGCCGAGTCATATGGGTTGGTTGAAGTCGTGAATTTCAGAAAGCGCCCAAGAAAGGCCACCCCTCAGAGGCCTCTCTTTGTTTTCATGTCTTAA 732 0.4167 MVGQNLLPKERSRDWIRALMNSSSGYCDDHHDLRSNEKNVFCVDCAVRFCRHCKEAHSLHKRFQIYKYSYQDVFRHTELQKYFDCSKIQTYISNNERIVHLKPRPSINKSKSADLCPESKSKETNLSLRLKSGGTCEECGKHLQDERNRFCSITCKISVLQVEPQNQGQNHRSQRSSVEPINHNARCITPKPEAIDFNMNDNHNSEPESSISEAESYGLVEVVNFRKRPRKATPQRPLFVFMS* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00120 243 Pfam PLATZ transcription factor 67 157 IPR006734 -
Rops2g00120 243 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 11 236 - -
Rops2g00120 243 ProSiteProfiles Zinc finger B-box type profile. 22 65 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00120 Rops-Chr2 1843851 1846074 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Rops2g00120 PLATZ 3.4e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00120 - - gmx:100815813 390.963