Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00118 ATGGCGCAAGGAGCATTGGAGCAAGTGCAATGCTTCGGCCGGAAGAAGACGGCGGTGGCAGTAACACACTGCAAGAGAGGCCGTGGTCTCATCAAAATCAACGGCTGTCCAATCGAGCTCGTCGAGCCTGAGATTCTTCGCTTCAAGGCCTTCGAGCCCATCCTCCTCCTCGGCAGGCACCGATTCGCCGGCGTCGATATGCGCATCCGTGTCAAGGGCGGTGGTCACACCTCTCAGATCTACGCCATCCGTCAGAGCATTGCCAAGGCACTCGTGGCTTTCTACCAGAAGTATGTGGATGAGCAGAGCAAGAAGGAGATCAAGGATATCCTCGTCAGTTACGATCGTACTCTCCTTGTTGCTGATCCAAGGCGCTGTGAGCCTAAAAAGTTTGGTGGTCGTGGTGCTCGTGCTAGGTTCCAGAAGTCTTACCGTTGA 438 0.5502 MAQGALEQVQCFGRKKTAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVSYDRTLLVADPRRCEPKKFGGRGARARFQKSYR* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00118 145 Pfam Ribosomal protein S9/S16 13 145 IPR000754 GO:0003735|GO:0005840|GO:0006412
Rops2g00118 145 FunFam 40S ribosomal protein S16 1 145 - -
Rops2g00118 145 ProSitePatterns Ribosomal protein S9 signature. 73 91 IPR020574 GO:0003735|GO:0005840|GO:0006412
Rops2g00118 145 Gene3D - 1 145 IPR014721 -
Rops2g00118 145 SUPERFAMILY Ribosomal protein S5 domain 2-like 8 145 IPR020568 -
Rops2g00118 145 PANTHER RIBOSOMAL PROTEIN S9 7 142 IPR000754 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00118 Rops-Chr2 1831253 1831909 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00118 2 145 Cytoplasmic Ribosomal Protein Gene Family AT2G09990 88.194 7.91e-94 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00118 K02960 - gmx:100527911 279.256