Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00115 ATGGTGAAACCCGAACTGGATTCTGGAGATTGTTTCATTTTTGGTCTGGTTTTGGTGCTTTCTGTTCTGGTTATCCCAACTAGGTGTCAGGATGCAGAAGTGATGGGCATTTTGAAGAACATGATCAATGCTCCCAGTAGCTTCCAATGGACAGACCCAGATGTATGCAAATGGAAGCACGTTCAGTGTGATTCAGGAAAACGTGTTACTGCTATTCAAATAGGGAACCAGAATCTTCAGGGCTCTCTCCCTAAGGAACTGGAGAAACTGACAGGGTTGGAACGTTTTGAGTGCCAGAGCAACAGTCTCACAGGGCCATTCCCTTACCTTTCAAAATCCTTACAGAGGCTGATAATCCATGACAACAAGTTCAGCTCCATTCCCAACGATTTCTTCAAGGGCATGAGAAGTTTGCAAGAAGTGAGAATTGACGACAACCCCTTCCCTCAATGGCAGGTTCCTGACACTCTTAGGGACTGCATTGCACTCCAGACTTTCAGTGCTGAGAATGTTGGCTTTGTTGGGACTATCCCTGAATTTTTTGGTAGAGATGGTCCCTTCCCGGGTTTGGTTCTTTTGGCCTTGTCTGGTAATTTTCTTGAAGGTGGGTTGCCTGCAAGCCTCTCAGGTAGTTCAATAGAGAACCTTTTGGTGAATGGACAGAATAGCAACTCTAAACTCAATGGTACCCTTGCTGTGTTACAGAAAATGGCATCTTTGAAGCAAATTTGGGCTAACGGTAATTCATTTACGGGTCCTATACCAGACTTGTCACACCTTGATCAACTGTTTGATGTGAATTTAAGGGATAACCAGTTGACTGGTGTTGTTCCACCCTCCCTAACGGGTCTTCCAAGTCTGCAAGTTGTAAACTTAACCAATAATTATCTTCAAGGATCCCCTCCCATGTTCAAATATGGGGTAGGAGTTGACAATAATATGGATAAGGGGAGAAATCAATTTTGCACAAATGTGCCTGGGCAACCATGTAGTCTCCTCGTGAATGCTTTACTATCTGTTGTTGAACCTTTGGGTTATCCTCTCAAGTTTGCCAAAAGTTGGCAGGGTAATGATCCGTGTGCTAATAAATGGACAGGGATAATGTGCTTAAATGGAAACATTTCGGTTATCAACTTTCAGAACATGGGTCTGTCTGGTACTATTTCTCCTAGTTTTGCCAGCCTTACATCTGTGACAAAATTGCTTCTTGCTAACAATGATCTCACCGGTAAAATACCAACTGAACTAACCAGTATGCCTCTTTTGCAAGAGTTCGATGTTTCTAATAATCATTTATATGGCCGTGTACCATCATTTCGGAAAGATATAGTTCTTAAATTAGGTGGGAATCCTGATATTGGAAAGGATAAACCTACTTCTCTAACCGGCTCTGATTTTGGAGGCAATCATAACAAACTTAATGCTGCGGCCATTGTTGGAATTGTGGTGGGAGTTGTCATTTTACTTGGTCTCGGGGCTCTAATACTTATTAAGTTCCGGAGAAAGTTGAAGCATTCGGGGAAAGTTCAAAATCCAACTGAAATTGTGGTACATCCTCGGAAGAGTGCATGTGGTGACGGAACTTCTGCATTAAGTCCCACATCTTGTAATATGGTAATTTCAATTCAAGTTTTGAGAGAAGTTACTGACAATTTTAGTGAGGAAAACATAGTGGGGAAGGGAGGTTTTGGAACTGTATACAAAGGAGAATTGCATGATGGGACAAAGATTGCAGTGAAAAGGATGCAATCAGGAATGGTGGATGAGAAAGGGCTGAGTGAATTCACGGCTGAAATAGCAGTGCTTACTAAGGTTCGACACAGACATTTGGTTGCACTCCTGGGGTATTGCTTGGATGGAAATGAGAAACTTCTCGTCTATGAGTACATGCCTCAGGGTGCTCTTAGTAAACATTTGTTACACTGGCAAGAGGAAGGGCTAAAACCACTGGAATGGAAGACAAGGCTTAGTATTGCCTTGGATGTTGCTAGAGGCGTTGAATATCTGCATGATATGACCCAACAAATTTTTATCCATAGGGATCTCAAACCATCCAACATTTTGCTTGGAGATGATATGCGGGCTAAAGTATCAGACTTTGGATTGGTTCGGCTTGCTCCTGAAGGAAAAGCCTCATTTCAAACTAGACTTGCAGGAACTTTTGGATATATGGCACCGGAATATGCAGCCACTGGACGACTTACAACAAAGGTTGATGTGTATAGTTTCGGAGTAATTCTTATGGAGATGATAACAGGAAGGAAAGCACTTGATGAGAGCCAACCAGAAGAGAACATACACCTGGTTGCATGGTTCCGCAAGGTGCTATTGAATAAAGATTCACTTCGAACGTTTATTGACCCAACAATTGAAGTTGACGAGGAAACCTATGTCAGTATAAGCACTGTTGCAGAGTTAGCCGGGCATTGCAGTGCAAGGGAGCCCTATCAGCGTCCCGACATGAGTCATGCAGTGAATGTACTATCACCTCTTGTTGAGGAGTGGAAGCCTACAGAACCAGATGCTGATGACATATATGGAATCAACTTTGATATGACGTTACCTCAAGTACTCCAAAGGTGGCAGGCTTTTGAAGGAAGAAGCACCATGGATTTAACAACTCCTCCTTCTTCGGTGCATGCTAGTGGAGACAACACAAAACAAAGTTAG 2670 0.4285 MVKPELDSGDCFIFGLVLVLSVLVIPTRCQDAEVMGILKNMINAPSSFQWTDPDVCKWKHVQCDSGKRVTAIQIGNQNLQGSLPKELEKLTGLERFECQSNSLTGPFPYLSKSLQRLIIHDNKFSSIPNDFFKGMRSLQEVRIDDNPFPQWQVPDTLRDCIALQTFSAENVGFVGTIPEFFGRDGPFPGLVLLALSGNFLEGGLPASLSGSSIENLLVNGQNSNSKLNGTLAVLQKMASLKQIWANGNSFTGPIPDLSHLDQLFDVNLRDNQLTGVVPPSLTGLPSLQVVNLTNNYLQGSPPMFKYGVGVDNNMDKGRNQFCTNVPGQPCSLLVNALLSVVEPLGYPLKFAKSWQGNDPCANKWTGIMCLNGNISVINFQNMGLSGTISPSFASLTSVTKLLLANNDLTGKIPTELTSMPLLQEFDVSNNHLYGRVPSFRKDIVLKLGGNPDIGKDKPTSLTGSDFGGNHNKLNAAAIVGIVVGVVILLGLGALILIKFRRKLKHSGKVQNPTEIVVHPRKSACGDGTSALSPTSCNMVISIQVLREVTDNFSEENIVGKGGFGTVYKGELHDGTKIAVKRMQSGMVDEKGLSEFTAEIAVLTKVRHRHLVALLGYCLDGNEKLLVYEYMPQGALSKHLLHWQEEGLKPLEWKTRLSIALDVARGVEYLHDMTQQIFIHRDLKPSNILLGDDMRAKVSDFGLVRLAPEGKASFQTRLAGTFGYMAPEYAATGRLTTKVDVYSFGVILMEMITGRKALDESQPEENIHLVAWFRKVLLNKDSLRTFIDPTIEVDEETYVSISTVAELAGHCSAREPYQRPDMSHAVNVLSPLVEEWKPTEPDADDIYGINFDMTLPQVLQRWQAFEGRSTMDLTTPPSSVHASGDNTKQS* 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00115 889 PANTHER OSJNBA0070M12.3 PROTEIN 12 879 - -
Rops2g00115 889 ProSiteProfiles Protein kinase domain profile. 552 832 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g00115 889 SUPERFAMILY L domain-like 335 439 - -
Rops2g00115 889 SMART serkin_6 552 832 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g00115 889 Gene3D Ribonuclease Inhibitor 333 457 IPR032675 -
Rops2g00115 889 SUPERFAMILY Protein kinase-like (PK-like) 532 828 IPR011009 -
Rops2g00115 889 FunFam receptor protein kinase TMK1 630 847 - -
Rops2g00115 889 FunFam Receptor-like kinase TMK4 29 327 - -
Rops2g00115 889 Pfam Leucine rich repeat N-terminal domain 335 369 IPR013210 -
Rops2g00115 889 Pfam Leucine rich repeat N-terminal domain 38 64 IPR013210 -
Rops2g00115 889 Pfam Protein kinase domain 553 826 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g00115 889 ProSitePatterns Serine/Threonine protein kinases active-site signature. 677 689 IPR008271 GO:0004672|GO:0006468
Rops2g00115 889 CDD STKc_IRAK 558 831 - -
Rops2g00115 889 Gene3D Phosphorylase Kinase; domain 1 521 629 - -
Rops2g00115 889 ProSitePatterns Protein kinases ATP-binding region signature. 558 580 IPR017441 GO:0005524
Rops2g00115 889 SUPERFAMILY L domain-like 33 305 - -
Rops2g00115 889 Gene3D Transferase(Phosphotransferase) domain 1 630 849 - -
Rops2g00115 889 Gene3D Ribonuclease Inhibitor 29 328 IPR032675 -
Rops2g00115 889 FunFam receptor protein kinase TMK1 519 629 - -
Rops2g00115 889 FunFam Leucine-rich repeat receptor-like kinase 332 456 - -
Rops2g00115 889 MobiDBLite consensus disorder prediction 869 889 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00115 Rops-Chr2 1769260 1772746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00115 69 833 Receptor kinase-like Gene Family AT5G07280 32.892 1.00e-86 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Rops2g00115 Pkinase 1.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00115 K00924 - gmx:100788903 1383.24