Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00057 ATGATTAAAAGAGGACAACTCAAAAAACCATACCTTGGTGTGTCCAATACCTTTAAGAGGGTCTTCAAGGAAGAGGGTCTGTTTGCCTTTTGGAGAGGTAACCAGGCCAATATTATAAGATATTTCCCCACGCAGGCTTTCAATTTTGCATTCAAAGGTTACTTCAAAAGCATTTTTGGATATTCCAAAGAGAGAGACGGGTACATTAAGTGGTTTGCTGGGAATGTGGCTTCAGGCAGTGCTGCAGGAGCAATTACTTCACTGTTTTTGTATCATTTAGACTATGCACGTACACGCTTGGCCACTGATGCATTGGAGTGCCGTGCTACTGGTCAGCGCCAGTTTAAAGGACTAATTGATGTATACCGCAAAACCTTATCAAGTGATGGAGTTGCCGGCTTGTACAGGGGATTTGGGGTTTCAATATGGGGAATCACCTTGTATCGAGGGATGTACTTTGGAATCTATGACACCATGAAGCCTATTGTTTTAGTTGGGCCTTTTGAGGGGAACTTTTTTGCTAGTTTCTTCTTAGGTTGGAGCATAACAACTTTCTCAAGTGTTTGTGCATACCCTTTTGACACATTGCGCCGGCGAATGATGTTAACCTCTGGACATCAGAACAGGAGCCGGGGTGCTCGCTGGATACGATCAGTTGAACCGTATCTCATCTAG 675 0.4385 MIKRGQLKKPYLGVSNTFKRVFKEEGLFAFWRGNQANIIRYFPTQAFNFAFKGYFKSIFGYSKERDGYIKWFAGNVASGSAAGAITSLFLYHLDYARTRLATDALECRATGQRQFKGLIDVYRKTLSSDGVAGLYRGFGVSIWGITLYRGMYFGIYDTMKPIVLVGPFEGNFFASFFLGWSITTFSSVCAYPFDTLRRRMMLTSGHQNRSRGARWIRSVEPYLI* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00057 224 ProSiteProfiles Solute carrier (Solcar) repeat profile. 70 162 IPR018108 -
Rops2g00057 224 SUPERFAMILY Mitochondrial carrier 8 208 IPR023395 -
Rops2g00057 224 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 1 210 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Rops2g00057 224 PRINTS Mitochondrial carrier protein signature 135 153 IPR002067 GO:0055085
Rops2g00057 224 PRINTS Mitochondrial carrier protein signature 33 53 IPR002067 GO:0055085
Rops2g00057 224 PRINTS Mitochondrial carrier protein signature 85 103 IPR002067 GO:0055085
Rops2g00057 224 PRINTS Mitochondrial carrier protein signature 179 201 IPR002067 GO:0055085
Rops2g00057 224 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1 58 IPR018108 -
Rops2g00057 224 Gene3D Mitochondrial carrier domain 1 219 IPR023395 -
Rops2g00057 224 Pfam Mitochondrial carrier protein 10 60 IPR018108 -
Rops2g00057 224 Pfam Mitochondrial carrier protein 71 162 IPR018108 -
Rops2g00057 224 PRINTS Adenine nucleotide translocator signature 11 32 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Rops2g00057 224 PRINTS Adenine nucleotide translocator signature 175 191 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Rops2g00057 224 PRINTS Adenine nucleotide translocator signature 70 83 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Rops2g00057 224 PRINTS Adenine nucleotide translocator signature 44 56 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00057 Rops-Chr2 996355 1000531 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00057 1 211 Antiporters AT5G17400 76.777 1.42e-120 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00057 K05863 - gmx:100776735 395.586