Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00054 ATGGGAGAATCAGTGGGAAATGGTAAGTCGCTCATGGAAGACCTCCTCGGCCTTTTAAGGATTCGCATCAAGCGTGGCGTCAACCTTGCCGTTCGTGATGTCAATACCAGCGATCCATACGTCGTCGTTAAGATGGGCAAGCAGAAATTGAAGACTCGTGTGATTAAAAAGGATGTTAATCCTGAGTGGAATGAAGACCTTACACTTTCTGTTACAGATCCTGTTGTTCCATTCGTACTGACGGTGTATGATCATGACACATTTAGCAAAGATGACAAGATGGGAGATGCAGAATTGGACATCTCACCATATATAGAGGCCTTGAAGATGAACTTAGAAGACCTCCCGAGCGGAACAATAATTACAAAGATACAACCATGCAGGCAAAACTGCCTGGCGGAGGAGAGCTGCATCATTTATAACAATGGCAAAATTATCCAAGATGTTGTCCTTAGATTGCGACATGTCGAATGTGGTGAGGTCGAAATCCAATTGCAATGGATTGATCTTCCCGGTTCCAAGGGTTTATCATAA 534 0.4382 MGESVGNGKSLMEDLLGLLRIRIKRGVNLAVRDVNTSDPYVVVKMGKQKLKTRVIKKDVNPEWNEDLTLSVTDPVVPFVLTVYDHDTFSKDDKMGDAELDISPYIEALKMNLEDLPSGTIITKIQPCRQNCLAEESCIIYNNGKIIQDVVLRLRHVECGEVEIQLQWIDLPGSKGLS* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00054 177 SMART C2_3c 18 113 IPR000008 -
Rops2g00054 177 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 14 174 IPR044562 -
Rops2g00054 177 Pfam C2 domain 17 103 IPR000008 -
Rops2g00054 177 ProSiteProfiles C2 domain profile. 1 114 IPR000008 -
Rops2g00054 177 CDD C2_ArfGAP 16 159 - -
Rops2g00054 177 Gene3D C2 domain 14 175 IPR035892 -
Rops2g00054 177 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 15 102 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00054 Rops-Chr2 975402 976492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00054 49 177 C2H2 Transcription Factor Family AT1G70790 58.779 3.67e-51 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00054 - - gmx:100799469 299.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00054 2 975402 976492 Rops5g00360 5 6305617 6307805 PCT