Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00038 ATGGCAGCGAGGCAAGACGGGTTAGGCAGAAATAAAAGCCTAGAGAGTCTGATGGACTCGTACAAACCAGGAGCTGCAAGAAATGTGAACCAGCTGAGGCCCCAGAAGTCCACTCCAGCAGGCTTAGGCCTAGAATTCAGTAACCTCTCATATAGTATCATAAAGAAGCAGAAAAAGGATGGAGTTTGGAGCAAGAAAGAAGCATATCTTCTTCATGATATCTCTGGCCAGGCAGTCAAAGGTGAAATTATGGCAATCATGGGGCCCAGTGGTGCTGGAAAATCCACCTTTCTTGATGCCTTGGCCGGGCGAATTGCAAAAGGGAGTCTAGAAGGATCGGTTCGAATTGATGGAAAGCCTGTAACTACAAGCTACATGAAAATGGTGTCATCATATGTGATGCAAGATGACCAGCTCTTCCCTATGTTGACAGTTTTTGAAACATTCATGTTTGCTGCTGAGGTTAGGCTTCCTCCTTCCATTTCCAGGGAAGAAAAGAAGAAGAGGGTTTATGAGCTCCTTGATACACTGGGATTACAGAGTGCTACACATACCTATATTGGCGACGAGGGAAGGAGAGGAGTGTCAGGAGGGGAACGACGAAGGGTATCTATTGGCATAGACATCATTCATAAGCCATCACTTCTGTTTCTGGATGAACCTACCTCGGGCCTCGATTCTACAAGTGCTTACAGTGTAGTGGAAAAGGTTAAAGACATAGCTCGAGGTGGTAGCATTGTCCTTATGACCATACATCAGCCTTCATTCAGAATTCAAATGCTCCTGGACAAGATCACAGTCCTTGCAAGGGGAAGACTGATATACATGGGAAAGCCAGATGCAGTTCAGGCTCACCTTTCCGGATTTGGAAGGCCTGTACCTGATGGAGAAAACAGTATTGAGTATCTTCTAGATGTTATAAGTGAATATGATCAAGCAACGGTTGGGCTGGACCCCCTTGTCCAATACCAACACGATGGCAACAAACCTGACCTAGCAGCCATTACACCTGTTCCAAGAACTCCAAGAACACCTAATAGAAAGAACACCCCTGCATCTAAACACATGATTAGCCTACGCAGCCAAGGATTTACTGCTGGAACACCACAACCTAATTCTGCACAGTTTAGCTATCATGATGAGGATGATGATGATGATGAGAATTTTGATAACTCCCTTGAAAGGAGAAGTGTTCAAACACCAAGGAACATCATGAGTAGTGGTGTTTACCCACGTTTGGCTTCTCAGTTCTACGAAGATTTCTCAGCCAAAGATTTCTCTGTCTGGCTTTACCATGGTGTAGTAGGAACCCCACGTCGCCAACCATCATGGACTCCAGCAAGAACTCCAGGATGGACACCTGGAAAAACACCAATGTCAGGACCAAGAAGTGTCGTTTCCAACCAACATTCTGCAGCTTATCAGGATCATTATGGCCCCAAAACTCCTTCAGTGGTTAGCCAGTCTATGGACTACTCTGCAACTTCATATGCACCTTCATATGAAGAGTTTGAGATTGAGGAAGTGCTTGATAAGCCAAACCATGGATCCAAGTATGCAAACCCATGGTTGCGTGAGGTTGCAGTGCTCTCATGGCGAACAGCACTCAATGTAATTCGCACCCCAGAACTCTTCCTCTCCCGTGAGATTGTGCTAACTGTTATGGCACTAGTTTTGTCCACCATTTTCAGAAATCTGAGTGGTACTACTTTCAAAGACATCAATAGGCTCCTCAATTTCTACATCTTTGCAGTGTGCCTTGTTTTCTTTTCTTCCAATGATGCAGTCCCATCTTTTATCATGGAAAGGTTCATCTTCATCAGGGAGACTTCACACAATGCTTACCGTGCTTCTTCATATGTCATTTCTTCCCTCATTGTTTACCTCCCATTTTTTGCGGTTCAAGGCCTCACATTTGCTGCCATAACCAAAGTAATGCTCCACTTGCACAGCAGTCTTTTCAATTTCTGGATGATACTTTACGCCTCCCTCATTACTACCAATGCATATGTGATGCTAGTTAGTGCACTTGTGCCTAGTTACATCACAGGGTATGCAGTAGTCATTGCCACAACAGCTCTCTTCTTTTTAACCTGTGGTTTCTTCCTCAAGCAATCTCAGATACCCATTTACTGGACGTGGCTCCATCATATTTCTGCAATCAAATACCCATTTGAGGCATTGCTGATAAATGAATTCAAGAATGACCGCGGTTGCTACACAGGAAACATAGCAGATTTATCCCCTGGACCATTAGGAGACGTGAAGCCCAGCAAACAGCATAACGCCACTCTGCCCCCTAACTGCTTATTAGGAGAAGATGTCCTGTCCACAATGGATATTACTAAAATCGAAAACCTATGGTATGACATCTTAATCCTGCTAGCTTGGGGTGTTCTTTACAGGTTCTCCTTCTACTTGGTATTGAGATTCTACTCCAAAAGTGAGAGAAAATGA 2457 0.4436 MAARQDGLGRNKSLESLMDSYKPGAARNVNQLRPQKSTPAGLGLEFSNLSYSIIKKQKKDGVWSKKEAYLLHDISGQAVKGEIMAIMGPSGAGKSTFLDALAGRIAKGSLEGSVRIDGKPVTTSYMKMVSSYVMQDDQLFPMLTVFETFMFAAEVRLPPSISREEKKKRVYELLDTLGLQSATHTYIGDEGRRGVSGGERRRVSIGIDIIHKPSLLFLDEPTSGLDSTSAYSVVEKVKDIARGGSIVLMTIHQPSFRIQMLLDKITVLARGRLIYMGKPDAVQAHLSGFGRPVPDGENSIEYLLDVISEYDQATVGLDPLVQYQHDGNKPDLAAITPVPRTPRTPNRKNTPASKHMISLRSQGFTAGTPQPNSAQFSYHDEDDDDDENFDNSLERRSVQTPRNIMSSGVYPRLASQFYEDFSAKDFSVWLYHGVVGTPRRQPSWTPARTPGWTPGKTPMSGPRSVVSNQHSAAYQDHYGPKTPSVVSQSMDYSATSYAPSYEEFEIEEVLDKPNHGSKYANPWLREVAVLSWRTALNVIRTPELFLSREIVLTVMALVLSTIFRNLSGTTFKDINRLLNFYIFAVCLVFFSSNDAVPSFIMERFIFIRETSHNAYRASSYVISSLIVYLPFFAVQGLTFAAITKVMLHLHSSLFNFWMILYASLITTNAYVMLVSALVPSYITGYAVVIATTALFFLTCGFFLKQSQIPIYWTWLHHISAIKYPFEALLINEFKNDRGCYTGNIADLSPGPLGDVKPSKQHNATLPPNCLLGEDVLSTMDITKIENLWYDILILLAWGVLYRFSFYLVLRFYSKSERK* 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00038 818 Gene3D - 44 289 IPR027417 -
Rops2g00038 818 MobiDBLite consensus disorder prediction 439 465 - -
Rops2g00038 818 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 286 IPR027417 -
Rops2g00038 818 SMART AAA_5 80 280 IPR003593 GO:0016887
Rops2g00038 818 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 44 295 IPR003439 GO:0005524
Rops2g00038 818 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 19 803 - -
Rops2g00038 818 Pfam ABC transporter 71 223 IPR003439 GO:0005524
Rops2g00038 818 MobiDBLite consensus disorder prediction 328 400 - -
Rops2g00038 818 ProSitePatterns ABC transporters family signature. 195 209 IPR017871 GO:0005524|GO:0016887
Rops2g00038 818 MobiDBLite consensus disorder prediction 342 376 - -
Rops2g00038 818 Pfam ABC-2 type transporter 527 733 IPR013525 GO:0016020|GO:0140359
Rops2g00038 818 FunFam ABC transporter G family member 6 59 286 - -
Rops2g00038 818 CDD ABCG_EPDR 41 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00038 Rops-Chr2 828356 831918 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00038 64 286 Calmodulin-binding Proteins AT2G36910 26.407 2.94e-15 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00038 K05681 - gmx:100819497 1343.95