Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00036 ATGGAGATGCTGCCTCAGAGACAGAAACACAGACACAGACACAGTTTTGGGTTACTACTCATGCCTCTGCTTCTTGTTCTATTATTTCTAGGAATAGGAGAAGTAGCAGAAGCAGATCTGGATTCAGAGCGAGCTGCATTGTTGGCTCTCCGTAAAGCAGTGGGTGGTAGAACCCTTTTCTGGAACGCCACCAACCAGAGCCCTTGCAACTGGGCTGGCGTCCAATGCGAACGCGACCATGTCGTCGAGCTTCACCTCCCTGGCGTAGCACTTTCCGGCCAATTACCCACCGGAATATTCGCCAACCTCACCCACCTCCGCACCCTCAGTCTCCGTTTCAACGCACTCAGGGGTTCACTCCCTTCAGATCTGGCCTCATGCGTCAACCTCAGGAACCTTTACTTGCAGCGAAACTTGTTCTCCGGCGAAATCCCACAGTTAGTGTTCCGTTTACCTGACCTGGTTCGCCTGAACATGGCCTTCAACAACTTCTCAGGTCCATTTCCAACCGCATTCAACAACTTGACCCGACTCAAAACCCTCTTCCTCGAAAATAACCAGCTCTCGGGTTCTATCCCTGAGTTTAACAGGTTGAGCTTGGAGCAGTTCAATGTCTCCAACAATTTGCTAAATGGGTCTGTGCCAGTGAAGCTTCAGACATTCTCTCAAGATTCCTTTTTGGGGAATTCCCTCTGTGGTAAACCCCTTTCTCTCTGCCCTGGAACCGGTGATGCTGCTTCTGCTTCTCCTGCTGACAATGCCGGTGCCGGAGGAAATAATAACGGCAAGAAGAAGAACAAGTTGTCTGGCGGAGCCATTGCCGGAATCGTTATTGGATCCGTGGTGGCTCTTCTGTTGGTTGCTTTCGTTTTGATCCTTGTGTGCAGGAAGAAAAAGAGTAGCAAAACAACCAGTGCAGTTGAAGTTGCAAATGTGAAGCATCTTGAATCGGAAGTTCCTGCTGAGAAGCCCCTTCCCGATGTGGAGAACGGAAATGGCAATGGATATATCAACAAGGTTGAAACCAATGGTAATGCTGTTAGTGCTGGTGCTGGTGGAGCTAAAAAGTTGGTGTTTTTTGGGAATTCCGCGGGGGCGTTTGATCTGGAGGATTTGCTGAGAGCTTCGGCGGAGGTGTTGGGTAAAGGGACTTTTGGGACAGCCTATAAGGCGGTTTTGGAGTCGGGACCGGTGGCGGCCGTGAAAAGGTTGAAGGATGTGACCATTTCTGAGAAGGAGTTCAAGGACAAGATTGAAGTGGTGGGAGCAATGGATAATCAGAATTTGGTCCTTCTCAGGGCTTACTATTTCAGCAGGGATGAGAAGCTCCTTGTTTATGATTACATGCCTATGGGAAGCTTATCTGCGCTTTTGCATGGAAACAAAGGAGCGGGTAGGACACCATTGAATTGGGAAATCAGATCAGGCATTGCACTTGGAGCTGCTCGTGGCATTGAGTACCTACATTCACAAGGGCCTAATGTTTCCCATGGAAATATAAAGTCATCTAATATCCTCTTAACCAAATCCTATGATGCCAGAGTATCTGACTTTGGCCTTGCACACCTTGTTGGCCCCTCCTCTACCCCCAACCGTGTTGCTGGTTACCGTGCGCCTGAAGTAACTGATCCTCGCAAAGTATCTCAAAAGGCAGATGTATACAGCTTTGGTGTATTGCTCTTGGAACTTCTTACTGGGAAGGCACCTACCCATGCCCTCCTAAATGAGGAAGGAGTAGACCTACCAAGATGGGTTCAATCCGTGGTTAGAGAAGAGTGGACTTCTGAGGTCTTTGATCTTGAGCTCCTTAGGTATCAGAATGTCGAAGAGGAGATGGTTCAGTTGTTGCAACTTGCAGTTGATTGTGCAGCACCATACCCTGATAAGCGCCCTTCAATGTCTGAAGTGACAAGGACCATAGAAGAGTTACGTCGGTCTAGCTTGAAAGAGGACCAAGACCAAATCCAACATGAACAGATCAATGATATGTTGTTATAG 1998 0.484 MEMLPQRQKHRHRHSFGLLLMPLLLVLLFLGIGEVAEADLDSERAALLALRKAVGGRTLFWNATNQSPCNWAGVQCERDHVVELHLPGVALSGQLPTGIFANLTHLRTLSLRFNALRGSLPSDLASCVNLRNLYLQRNLFSGEIPQLVFRLPDLVRLNMAFNNFSGPFPTAFNNLTRLKTLFLENNQLSGSIPEFNRLSLEQFNVSNNLLNGSVPVKLQTFSQDSFLGNSLCGKPLSLCPGTGDAASASPADNAGAGGNNNGKKKNKLSGGAIAGIVIGSVVALLLVAFVLILVCRKKKSSKTTSAVEVANVKHLESEVPAEKPLPDVENGNGNGYINKVETNGNAVSAGAGGAKKLVFFGNSAGAFDLEDLLRASAEVLGKGTFGTAYKAVLESGPVAAVKRLKDVTISEKEFKDKIEVVGAMDNQNLVLLRAYYFSRDEKLLVYDYMPMGSLSALLHGNKGAGRTPLNWEIRSGIALGAARGIEYLHSQGPNVSHGNIKSSNILLTKSYDARVSDFGLAHLVGPSSTPNRVAGYRAPEVTDPRKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSVVREEWTSEVFDLELLRYQNVEEEMVQLLQLAVDCAAPYPDKRPSMSEVTRTIEELRRSSLKEDQDQIQHEQINDMLL* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00036 665 Gene3D Phosphorylase Kinase; domain 1 346 448 - -
Rops2g00036 665 Gene3D Ribonuclease Inhibitor 40 197 IPR032675 -
Rops2g00036 665 Pfam Protein kinase domain 377 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g00036 665 SUPERFAMILY L domain-like 61 218 - -
Rops2g00036 665 FunFam Probable inactive receptor kinase At1g48480 449 652 - -
Rops2g00036 665 PANTHER OS05G0588300 PROTEIN 21 647 - -
Rops2g00036 665 Pfam Leucine rich repeat N-terminal domain 41 76 IPR013210 -
Rops2g00036 665 FunFam pollen receptor-like kinase 1 343 448 - -
Rops2g00036 665 ProSitePatterns Protein kinases ATP-binding region signature. 380 402 IPR017441 GO:0005524
Rops2g00036 665 Gene3D Ribonuclease Inhibitor 199 239 IPR032675 -
Rops2g00036 665 ProSiteProfiles Protein kinase domain profile. 374 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g00036 665 Pfam Leucine rich repeat 94 139 IPR001611 GO:0005515
Rops2g00036 665 ProSiteProfiles Leucine-rich repeat profile. 177 199 IPR001611 GO:0005515
Rops2g00036 665 SUPERFAMILY Protein kinase-like (PK-like) 378 643 IPR011009 -
Rops2g00036 665 Gene3D Transferase(Phosphotransferase) domain 1 449 663 - -
Rops2g00036 665 FunFam Probable inactive receptor kinase RLK902 40 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00036 Rops-Chr2 815524 818559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00036 39 644 Receptor kinase-like Gene Family AT1G48480 63.607 0.0 783
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Rops2g00036 Pkinase 4.2e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00036 - - gmx:100818955 991.104