Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00031 ATGAGCACTAATATATCTGGTATGGAAAAGGTTGATTTCATCAACTCAAAAATAGATATGGAATCTCATAGGAACAGTAATGGAGAAGAAGAGTTAGAATTTGAAGAAGAACAGGAACAAGAGTATGAAGATGAAAAGGATGAGAACCTCAAGAGAAGAATCTCTGGCCATCCTCTCTATCAACTGCTGGTTGAAGCTCACTTGGAGTGTTTGAAGGTTGGTGACATTCCCAACTTGGATAGAGAGCAGAAGATTTTGCAGATACAAGCAATGAAGAAACAAAACTTGGGCATGTTCAGTCAGTCAGAGCTTGATCTCTTCATGGAATCATATTGCCTGGTACTAGGCAAGCTAAAAGAAGCAATGGAGGAACCACAACAAAAGTCCCTGGATTTCATCAATAACATGCATACTCAACTTAGGGAGCTCACTAACACGACCATGCATGCACCTGCTGAATCTGCAACTACAGCATCCGCATCTTCTAGAGAGTGCAAATTCTAG 504 0.4067 MSTNISGMEKVDFINSKIDMESHRNSNGEEELEFEEEQEQEYEDEKDENLKRRISGHPLYQLLVEAHLECLKVGDIPNLDREQKILQIQAMKKQNLGMFSQSELDLFMESYCLVLGKLKEAMEEPQQKSLDFINNMHTQLRELTNTTMHAPAESATTASASSRECKF* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00031 167 Coils Coil 20 52 - -
Rops2g00031 167 SMART KNOX1_2 48 85 IPR005540 GO:0003677|GO:0005634
Rops2g00031 167 Pfam KNOX1 domain 50 77 IPR005540 GO:0003677|GO:0005634
Rops2g00031 167 MobiDBLite consensus disorder prediction 16 50 - -
Rops2g00031 167 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 20 147 - -
Rops2g00031 167 SMART KNOX2_2 94 145 IPR005541 GO:0003677|GO:0005634
Rops2g00031 167 MobiDBLite consensus disorder prediction 16 30 - -
Rops2g00031 167 Pfam KNOX2 domain 102 144 IPR005541 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00031 Rops-Chr2 686601 690052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00031 48 149 Homeobox Transcription Factor Family AT4G08150 35.185 1.14e-13 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00031 - - aprc:113868091 183.341