Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00030 ATGGCAGTTGTACGTGACCGCCGCCAATTCAATCTCCGCCTCCCCCTTCCCCTCCCGGAGCCCCGCCCCCGTTTTCCCCTCCCCCTCCCACCAGCCTCCGCTGCCATCGGCCCCAATGACATCGAAAAGCTTCACGTTCTCGGCCACGGCAACGGAGGCACCGTCTACAAAGTCCGCCACAAACGCACCTCCGCAGTGTACGCTCTCAAGGTCGTCCACGGAGACTCCGACCCGGCGACCCGACGCCAGATCAGACGGGAAATGGACATCCTCCGGCGAACGGACTCAGCTCACGTGGTCCAGTTCCACGGGTTCTTCGAGAAACCCTCCGGCGATGTGTGCTTCGTGATGGAGTACATGGATTCTGGCTCGCTGGAGACGATGCTGAAGAACAAGGGGACCTTCTCCGAAGTGCAGCTGGCGGCGGTGGCGCGTCAGGTTCTGAGCGGGCTGAGCTACCTCCACGCACACAAGATCATACACCGCGACATAAAGCCGTCGAACCTTCTGATGAATGGGAGGATGGAGGTGAAGATAGGGGATTTCGGAGTGAGCAAGGTGATGTGTCAGACCCTGGACGCGTGCAATTCGTACGTGGGAACCTGCGCTTACATGAGTCCAGAGCGGTTCGACCCGGATTCATATGGCGGGAATTACAATGGGTATGCGGGTGATATTTGGAGCTTGGGTTTGACCCTGTTTGAACTCTACGTGGGTCACTTCCCCTTCCTTCCAGCGGGTCAGAGACCCAACTGGGCTGCCCTTATGTGCGCCATATGTTTCGGGGACCCACCCTCCTTGCCCGATTCTGCGTCCCCTCACTTTCAGAGCTTCATTCAGTGTTGCTTGAATAAGGATTTCAATCAGCGGTGGACCGCGCCTCAGCTCTTGACCCACCCCTTTCTCACTTCTGCTCTGCTTTGCTCACTAGTTAGTTAG 939 0.5793 MAVVRDRRQFNLRLPLPLPEPRPRFPLPLPPASAAIGPNDIEKLHVLGHGNGGTVYKVRHKRTSAVYALKVVHGDSDPATRRQIRREMDILRRTDSAHVVQFHGFFEKPSGDVCFVMEYMDSGSLETMLKNKGTFSEVQLAAVARQVLSGLSYLHAHKIIHRDIKPSNLLMNGRMEVKIGDFGVSKVMCQTLDACNSYVGTCAYMSPERFDPDSYGGNYNGYAGDIWSLGLTLFELYVGHFPFLPAGQRPNWAALMCAICFGDPPSLPDSASPHFQSFIQCCLNKDFNQRWTAPQLLTHPFLTSALLCSLVS* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00030 312 CDD PKc_MAPKK_plant_like 39 305 - -
Rops2g00030 312 ProSiteProfiles Protein kinase domain profile. 41 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g00030 312 FunFam Mitogen-activated protein kinase 2 122 310 - -
Rops2g00030 312 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Rops2g00030 312 ProSitePatterns Protein kinases ATP-binding region signature. 47 70 IPR017441 GO:0005524
Rops2g00030 312 Gene3D Transferase(Phosphotransferase) domain 1 117 307 - -
Rops2g00030 312 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 38 304 - -
Rops2g00030 312 SMART serkin_6 41 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g00030 312 SUPERFAMILY Protein kinase-like (PK-like) 39 306 IPR011009 -
Rops2g00030 312 Gene3D Phosphorylase Kinase; domain 1 31 116 - -
Rops2g00030 312 Pfam Protein kinase domain 42 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00030 Rops-Chr2 679658 680596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00030 1 306 MAP Kinase Kinase Gene Family AT1G73500 60.828 1.55e-133 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Rops2g00030 Pkinase 1.1e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00030 K20604 - qsu:112004321 458.759