Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00018 ATGGATGGGGATAACAGTCTTAACATACGTAATTGGTGTTACTATGAGCCCACCACTTCTTTTAAGAGCCATCTTGGGCTACAGCTAATGCCTGAAAAACCTCTACTTGGAGCACGCAATGCTGCTGTTTTATCTGCCACAAGCACAACAAGTGCCCCATTTCACCATAGGGACATTGGGATGCCCCAACCTACATACCCTATGGATTACATGAGGGATGCTTGGATCAATCATAGAGACAAGTTCATGAATATGAATATGAATATGATACCTACAAACCCCAATTATGCTGTTATTCCTCCAGAGACATCTTCCCCACATCAAATACAAATGATTCAACCGCCTGAATTGCCCAAGGAAGAAGCACCAATGGAAGAGCCACCTGTTGAGAAGGCCAATGGAACTAGTAAGAAAAGGAAGCAGGTTCCCAAGTCCCCCAAGGTGAAGAAGCCCAAGAGAAGGCCTTGTGTGCCAAAGGATGAGAACACTCCTTCAGTTCAACGAGCAAGGACTGCAAAGAAAACTACTGAAATTGTAATAAACGGGATTGATATGGATATTTCCACCATTCCTGTACCTGTTTGTTCTTGCACCGGGACACCTCAACAGTGTTATAAATGGGGCTCTGGTGGGTGGCAATCTGCATGTTGCACAACAGGCATATCAATGTATCCTTTGCCTATGAGTACCAAACGTCGTGGTGCAAGGATAGCTGGAAGAAAAATGAGTATAGGGGCGTTTAAGAAAGTTCTAGAGAAACTTGCAGCAGAGGGTTATAACTTTTCTAATCCAATTGATTTGAGGACTTATTGGGCAAAACATGGCACCAACAAGTTTGTCACTATCAGGTAG 852 0.4366 MDGDNSLNIRNWCYYEPTTSFKSHLGLQLMPEKPLLGARNAAVLSATSTTSAPFHHRDIGMPQPTYPMDYMRDAWINHRDKFMNMNMNMIPTNPNYAVIPPETSSPHQIQMIQPPELPKEEAPMEEPPVEKANGTSKKRKQVPKSPKVKKPKRRPCVPKDENTPSVQRARTAKKTTEIVINGIDMDISTIPVPVCSCTGTPQQCYKWGSGGWQSACCTTGISMYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDLRTYWAKHGTNKFVTIR* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00018 283 PANTHER - 1 283 IPR010409 -
Rops2g00018 283 MobiDBLite consensus disorder prediction 119 171 - -
Rops2g00018 283 SMART GAGA_bind_2 1 283 IPR010409 -
Rops2g00018 283 MobiDBLite consensus disorder prediction 138 153 - -
Rops2g00018 283 MobiDBLite consensus disorder prediction 119 137 - -
Rops2g00018 283 Pfam GAGA binding protein-like family 1 283 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00018 Rops-Chr2 507499 508851 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00018 1 283 BBR or BPC Transcription factor family AT2G01930 49.669 1.01e-88 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Rops2g00018 GAGA_bind 2e-103 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00018 - - gmx:606296 434.491