Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00011 ATGACAGACACCAACTCAGTGGATGTGATATTGAACTTTCTCAAGAGAAATCGATTCACGAGAGCTGAGGCAGCTTTGCGCAGTGAAATAAATAATCATCCCGACTTAAATGGCTTCCTTCAGAAGCTTACATTGGAAGAAAAGGCCTCACGTGATGCTCCACAAAATAACAAGGGGAAACCTGTGCTAGAGATTCAAGGGGATAATGCTGAAGTTTCCAAAGAACTGATTGTGAAGGAAATAGAGTGTGGGACTGGTCAAAATGCCACTGAAAGCAAATGGAAAATTGTTGCTCCTTCTATTGTGGATCTGAATAAATCAGTTGAAGTAGTTGGGACAGGTGACAAAAACTTCACTTTCTCTAAGAGTTCGGAGGACAATATGCTCAATTTATACTCATGGAAGTTCAATCCTAGCAATGGTCCTGTGGAGCCTCACCAAAATGATGGTGGTGGTAGGGCTAATAATTCTTTGAAGGCCTCTGTATCTCAACAATCAAAATATCCAACTAATGAAGCTGTCAATGTAATTGCGGCCAACACCTATTCAAAGTCTGGGGAGGAAAGTTCTGTACTTACTGATAAAAAATCCTTGTGGCTTGGAAGTAGTAATAAAGCCTCCATGGATCCAAAGTACGACCTTGTGCAAAGCAAAGAACATAGGGAACTTGATCGGCAGCTTAAATTTAATAGTTCATCTCTTAAAGTGAACTTTGCAGATAATCCCTGGTCAAAAACTGATGAGAATGCAATTTCATCTTCAGACTCGTGCAAAGATTGTTCTGTCAAGACTGTCTTCCCCTTCTCAAAGGGGGATATATCTACAAACTTTGATGGTGCAACTTGTTCTGACAAAAAAGAGGAGACAAGAAAGGTAGAAACTAGTGATATTAGAGCAGCTATGAAAGAGCAGGTGGGTGAATTGGGGAGGGCTATTTATTTGGGCAAGTCACAAGGCAGTTCTGAACAGAAGACAATTGGCAGCTTAAGTTTTCCTCTTGTCCCTGAAAATCAGAAGGAAGAGTTTCCTCGGCTTCCTCCGGTTAAACTCAAGTCAGAAGATAAGCCCTTGGTTGTTAATTGGGAGGAGAAGTTTGAGCGAGATGGACCAAATTCGAAACTTGATGGTGCTGACAGTACTTTGCTTATCGGTTCATATCTAGATGTACCTATCGGACAAGAAATTAACCCTTCAGGTATGAGGAGGGCTGCAGCGGGCAGTTGGTTATCCGTAAGTCAAGGGATAGCAGAGGATACGTCTGATCTTGTATCGGGTTTTGCAACAGTTGGAGATGGGTTAAGTGAATCTGTTGATTATCCAAATGAGTATTGGGACTCTGATGAATATGATGATGATGATGATGTTGGGTACATGAGACAACCTATTGAGGACGAGGCCTGGTTTTTGGCGCATGAAATTGATTACCCCAGTGACAATGAAAAGGGGACTGGGCATGGAAGTGTTCCAGATCCTCAGGAAAGAGGTCCAGCCAAAGATGAGGATGATGATCAATCTTTTGCTGAGGAGGATTCTTACTTCTCTGGGGAGCGATATCTCCAGACAAATAATGTTGAACCAGTCACAGCTTCTGATGATCCTATTGGCCTAACAGTTACTGAAATGTATGGAAGGACTAATGATAATGATTTAATGGCTCAATATGATGGACAATTGATGGATGAAGAAGAATTGAACCTGATGCGTGCAGAACCTGTCTGGCAGGGCTTTGTCCCTCAGACAAATGAACTCATCATGCTAGGAGATGGGAAGGTTTTGAATGATAGTTTAAGATCTCGTCTAGAGGATATCTGTATGCATGATGATCAACATGGTTCAGTTAGGTCAATTGGGGTGGGGATCAACAGTGATGCTGCAGATATAGGTAGTGAAGTGCGTGAAAGTTTGGTTGGTGGTAGCAGTGAAGGGGATTTCGAATATTTCCGTGATTGTGATGTTGGACTTGGTGGTTCCAGAAACTCTAATCATGATTTGGATAAGAAGTCTATTAGCATATCAAACAAAAATAAAATGAAAAATGTTAAGAGTGAGTCAAATAAATATGTCATAGGAGGTGATAAAGAAGCACAGTTGCAGATGAAAACTCATAGTGATGGGAACTTCTCATTTCCCCTATCTTTGAAGGATGGGCAGATGAATCAGGCTGCCTCTGATAAGTCCCTGTGGTCAAATAACTGCAATGCAGACGAAACTGATGACTGTCTTAATGCATTTGTGGCATCTGATGACATGCTTACTTCGTGGAGGCGAAAGAGCAGTGATTCTTCGCCCGCTAAAAGTTCCAGGGATGAGAATAATGCTAATGCAGTAAGATCAACAAACTCTTCTCCGACAACAGTCTCGAATTATGGATACTCTGAAAGAGAGCATGCCAAGCTAGAAGAGGATGAAAATGTTGGAGTTGCTATGGAAGATGATCTAGGGGCATCTCTAGAGGATGACGAGGCAGCTGCTGTGCAAGAGCAAGTAAAGCAAATAAAGGCCCAAGAGGAGGAATTTGAAACCTTCAATCTAAAGATTGTGCACAGGAAAAACAGAACTGGCTTTGAGGAGGACAAGAATTTCCATGTTGTTTTAAATTCTGTAATAGCTGGAAGGTATCATGTCACTGAATATTTGGGATCTGCTGCATTTAGCAAAGCCATACAAGCTCATGACCTGCACACAGGCATGGACGTTTGTGTTAAAATTATAAAGAACAACAAGGACTTTTTTGACCAAAGCCTTGATGAGATTAAGCTTCTCAAGTATGTCAATAAGCATGATCCTGCAGACAAGTATCACATTCTTCGATTATATGATTATTTCTATTATCGAGAACATTTGTTAATAGTATGTGAACTACTTAAAGCAAACTTGTATGAATTTCATAAATTTAATAGAGAATCAGGGGGTGAAGTGTACTTCACAATGCCAAGATTGCAGTCAATTACCATTCAGTGTTTGGAAGCACTTCAGTTTTTGCATAGCCTTGGACTGATACATTGTGACTTGAAGCCGGAGAATATTTTGGTTAAAAGCTATAGCAGATGTGAGGTGAAGGTCATTGACCTCGGAAGTAGTTGTTTTGAGACAGATCACCTTTGCTCTTATGTTCAGTCAAGGTCCTATCGTGCTCCTGAGGTTATTTTGGGACTTCAGTATGACAAGAAGATTGATATCTGGTCACTTGGCTGCATCTTGTCAGAACTTTGTACTGGAAATGTCCTCTTCCAGAATGATTCACCTGCAACATTACTTGCTCGGGTGATCGGGATCATTGGTCCAATTGATCAAAGTATGCTTGCAAAAGGTCGGGACACATACAAATACTTCACCAAAAATCATATGCTTTATGAACGGAATCAGGAAACCAATAGGTTAGAATACTTGATTCCGAAAAAGACATCCTTGAGGCATAGATTGCCAATGGGAGACCAAGGCTTCATTGACTTTGTTGCTCATTTGCTTGAGATCAACCCTAAGAAGCGGCCATCTGCATCTGAGGCCCTGAAGCACCCATGGTTATCATACCCGTATGAACCCATATCATCTTAA 3555 0.4113 MTDTNSVDVILNFLKRNRFTRAEAALRSEINNHPDLNGFLQKLTLEEKASRDAPQNNKGKPVLEIQGDNAEVSKELIVKEIECGTGQNATESKWKIVAPSIVDLNKSVEVVGTGDKNFTFSKSSEDNMLNLYSWKFNPSNGPVEPHQNDGGGRANNSLKASVSQQSKYPTNEAVNVIAANTYSKSGEESSVLTDKKSLWLGSSNKASMDPKYDLVQSKEHRELDRQLKFNSSSLKVNFADNPWSKTDENAISSSDSCKDCSVKTVFPFSKGDISTNFDGATCSDKKEETRKVETSDIRAAMKEQVGELGRAIYLGKSQGSSEQKTIGSLSFPLVPENQKEEFPRLPPVKLKSEDKPLVVNWEEKFERDGPNSKLDGADSTLLIGSYLDVPIGQEINPSGMRRAAAGSWLSVSQGIAEDTSDLVSGFATVGDGLSESVDYPNEYWDSDEYDDDDDVGYMRQPIEDEAWFLAHEIDYPSDNEKGTGHGSVPDPQERGPAKDEDDDQSFAEEDSYFSGERYLQTNNVEPVTASDDPIGLTVTEMYGRTNDNDLMAQYDGQLMDEEELNLMRAEPVWQGFVPQTNELIMLGDGKVLNDSLRSRLEDICMHDDQHGSVRSIGVGINSDAADIGSEVRESLVGGSSEGDFEYFRDCDVGLGGSRNSNHDLDKKSISISNKNKMKNVKSESNKYVIGGDKEAQLQMKTHSDGNFSFPLSLKDGQMNQAASDKSLWSNNCNADETDDCLNAFVASDDMLTSWRRKSSDSSPAKSSRDENNANAVRSTNSSPTTVSNYGYSEREHAKLEEDENVGVAMEDDLGASLEDDEAAAVQEQVKQIKAQEEEFETFNLKIVHRKNRTGFEEDKNFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPADKYHILRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHSLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLQYDKKIDIWSLGCILSELCTGNVLFQNDSPATLLARVIGIIGPIDQSMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASEALKHPWLSYPYEPISS* 1185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00011 1184 ProSitePatterns Serine/Threonine protein kinases active-site signature. 999 1011 IPR008271 GO:0004672|GO:0006468
Rops2g00011 1184 FunFam Putative serine/threonine-protein kinase dyrk2 867 954 - -
Rops2g00011 1184 Gene3D Phosphorylase Kinase; domain 1 867 954 - -
Rops2g00011 1184 SUPERFAMILY Protein kinase-like (PK-like) 862 1177 IPR011009 -
Rops2g00011 1184 CDD PKc_DYRK_like 873 1175 - -
Rops2g00011 1184 ProSiteProfiles Protein kinase domain profile. 873 1175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g00011 1184 FunFam Serine/threonine-protein kinase ppk15 952 1176 - -
Rops2g00011 1184 SMART serkin_6 873 1175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g00011 1184 MobiDBLite consensus disorder prediction 475 517 - -
Rops2g00011 1184 MobiDBLite consensus disorder prediction 753 790 - -
Rops2g00011 1184 Coils Coil 825 845 - -
Rops2g00011 1184 Gene3D Transferase(Phosphotransferase) domain 1 927 1175 - -
Rops2g00011 1184 Pfam Protein kinase domain 873 1175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g00011 1184 MobiDBLite consensus disorder prediction 756 790 - -
Rops2g00011 1184 PANTHER DUAL SPECIFICITY PROTEIN KINASE 407 1175 - -
Rops2g00011 1184 MobiDBLite consensus disorder prediction 139 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00011 Rops-Chr2 227784 240493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00011 872 1170 MAP Kinase Gene Family AT5G19010 31.034 2.64e-30 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Rops2g00011 Pkinase 4.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00011 - - gmx:100786225 1868.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04137 2 75088338 75094424 Rops2g00011 2 227784 240493 ECH
Rops2g00011 2 227784 240493 Rops2g00011 2 227784 240493 ECH
Rops2g00011 2 227784 240493 Rops5g00431 5 7431359 7441412 PCT