Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00008 ATGTGTTGCTTGATGACAGATGACAGACCTCACCCCTCACCTAACTCTGATAGTACCCTCCCAACCATTAAAGGAATACAACATTTCTCCTCTCTTGTACGTGGACGAAATAGGCCCAAAACATTGCCAAAAACATTATTCCATTTTGAAAGCTTACATTGTCAGTGGTGTCACAGACACAAAATGGCCAAGAGATCAGATTTTGCACAGAAGCTGCTGGATGATCTCCGGCTAAGGAAAGAACGAATGGCTTCATCTCAGAGGTCACACCAATCCCACCATTTGCCTGTAGATGCATACGCTTACACCAAGCAAACATACAGAGGATCCAGAAATACAAAAGCTAATGAAATTGTTAGTAGCAGAACTGGGGAGATGATGAATAGGAGGCAGGGATCAGTGAACATTGTAGAATTGTCAAATCAGATTATTCCATTTGGGAAAGGTCAGAGCTCGGGTAATATGTCCCAAGCACTGGCTTTTGCCTTTGAGAATGGAGGGAAACTCAGAAGGGCTGATTTTTCTTATACTAATTCAATTATGGGTTTACTTCACCAAATTAAAAGGGGAACAATGGAATTCGGCGTGTCTGAAAGTGGAAGAAATTTGGATAGGCAACTAGCTTCAACTAGCCACTATCCTAATCTCTCTCTTACGCAGATAAATGAAATATCCAAAGGTGCACAGAAACTGAACCACATATTGAGAGCCTGCTCCAATGGTCTTAACATGGATACGTATTCATTACAATTTGCAAAGGAACTATTACAAGGAGCTATTGATTTGGAAGAGTCCCTCAGGATGCTAGTAGACCTGCAGAAAAGTTCAGAGTTTATGATCACCCCGCAGGCTCAGAACAAAACTCGAATCAGACTATTAGAGGAGGATAATGATGAGGATGATGATAGAAGGAGGGAAATTTCTGAGCAAATGCAACTGGCACCACCAACTTTCTCCTTTGACAAGCCCTCAAGGCATACTCAAAACATCCAAGAAATTGGAAAGGCTATTTTCATGCAGAGGCCAACTATTCTCACCAACACTAAGGAAGCCAGAAACTCAAATAATGGAAAGAAAAATGTGAAGATACAGGTTTCTCAGAAGCGATCAACTAGCTCTAGCTCTGATATTTCAGAACGGAAAAACCAGACGGCCTCCAACCCTGAGAAGGGCAGGATTCCAAATGTAATAGCCAAATTAATGGGGCTGGACAACCTTCCTGAGAAAGTGGAAATGGAATCAAAACACATGCTACAGAAGGATTCAGGTAATACACAGAAAATACAAGGAATGACATCCAAGCATAATGCAAAAGGAAGCACTAAGAAGACCGAACTGAAGAGCAAACAAACGCACAATTTGATACCTATGGCTATGAAAAACCAACAAGTGGTAGGAGCCTTCAAAATTCCCGCAACTCAGAATGAGGAGCTGATGATTGGTCCGCCACTCCAAAAGGCCAGCTCTGAGGTGATTGTTCAGAATGGAAAAGCGCTACGGAGGGACCTGGATGGAATAAAAGAATCGAAAGGCTTTGACAAGGCCAGCATCAAAATAGACAAACATGACAAGAGTTCCGCTCAAAAGAACCTTATTAGAGAAAGTCAAAATGATTTTCAGGTGATAGGAAGAAAACAGGATCATCCAAATAACAGTAACAGAGAACAGAAAGGGGCAGTAAAGGGCAGAACCAATGATCCAGTTCTAAATAATATGCTGGCCCAGCTGGAACAAGAAAGATCAGAAGTTAAATCTTCAATTCAGGTTGAAAAAGAAATCAATGGAAGTATTATTCAACCGGAAAAAAGACACACAACCAAGCACATATTGAACAATGAAAAGAAGTCTCGGAACCATCTTGGATTTCAAAAGTCATACATACTCTCCAAAAATGGGCCTCAAGAAGAAAAGCATAATAGAGAACAGCAGCTCCAGCAAAGGGAAGAACAAATGTTGATGATGACACCACAAGGAGGTAGTGAAATGACACCCAAGAATTCATCAAAACACCCTCATCAATTGATCAATCCTCAGAAGAAACAGTCATCCATAAACCAAGCTACACTGTTCAAGAAAAACTCTGGAGAAAATGTTGCTGCTATGAAATCAGAGGGCTTTTTAAGTAGCCACTATGATGATCATGATCTAGTCAGAGATGAAGCATCCAAAGACATAGATGACAAGGTAAAAGAAATTATCAATAGGAAGTCAGGCCAAATTTCCTCTCCAAGAGATCAAGAATTTGAACGAGCAAAAGGAAGGCATGGCGTCAAAACACTGAAGGATGAAAAACACGTTCATAAACTGGCCAGCAAGAAAATAAAGAATACCAGAAAACAAAGAGTTGACATGCCTGGAAAGATTGATCAAATGTTGACCGGAAGAAATGGAGCAAAGCTCATCGCTGAACTAGGAAAACAACAGGTTCCCAATTTGCAAGAAGCAAGAGATAGAGCATCTGACAAATTCAATGTCTTAAACGGAGCGGAGGAAGAAAGTGCTGGTATGTTCAAAGAAGCTAATGCACGCATCATGAGCTCCAATGAACCAGTAGCTGTGGTTGAACCATTGGATGTGAGGCGCCAACCACATAAGGAAGCTGAGCTGCCTCCTACATTATATGGTTCTAGTGGCGGAAAACTTCAAAGCCAACAAGAATCGTTAGTTTCACTTCCCAATGATTTGCATTACCAAGATGTGCAAACGGTAGCAATCAATTTGCAAGATCAAGCTGTTGCTGTGGCAGCAGATGAAGGATTCAAGACTGGTGAAATTGCATTCCATAAAACAAATGGAATTCTAGAAGACAGAATGGGTATTAACCAATCTCAACCACAATATCATAATACTTTCGAAATAAACATCCAACAACCACTAACAGACAGTGAAAACTGCCTCAAGTGGATTTTGGTCATGAGTCAACTATTCGTCAACACTGCAGAAGCGCTTTTCAGACTCAACATCCCGTTTAGCGTTCTTCAAGGTAGTGGTCAAGACATTCAAGACCAAGGTAGCAAACTCATATTAGACTGTGGCTATGAAGTGATGAAAAGAAAGGGGATACGGCAGGAACTCAAAGTTCATACTTGTTCAAGAATATCAATCAGTACTGTGCAAATAAGATCCCTAGATGACTTGGTTAGGCAGCTGAATGAAGACATGGAGAAGCTCAAATTCTACGGTAGGAAAAAAAGTTCCCAAGTTGATGTTGAGGACTACCTGCCTAAAATGCTTGAACATGATGTGTATGATAAAGATCCAGACATAGACTGCATGTGGGATTTAGGTTGGAATGATGAGACATTTGCATTCATCGAAAAATATGATGTTATAAGGGATACAGAAAAGCATATCCTCAGTATACTTCTGGATGAAATCACCGGAGATTGTTGCATGTACTGA 3402 0.4071 MCCLMTDDRPHPSPNSDSTLPTIKGIQHFSSLVRGRNRPKTLPKTLFHFESLHCQWCHRHKMAKRSDFAQKLLDDLRLRKERMASSQRSHQSHHLPVDAYAYTKQTYRGSRNTKANEIVSSRTGEMMNRRQGSVNIVELSNQIIPFGKGQSSGNMSQALAFAFENGGKLRRADFSYTNSIMGLLHQIKRGTMEFGVSESGRNLDRQLASTSHYPNLSLTQINEISKGAQKLNHILRACSNGLNMDTYSLQFAKELLQGAIDLEESLRMLVDLQKSSEFMITPQAQNKTRIRLLEEDNDEDDDRRREISEQMQLAPPTFSFDKPSRHTQNIQEIGKAIFMQRPTILTNTKEARNSNNGKKNVKIQVSQKRSTSSSSDISERKNQTASNPEKGRIPNVIAKLMGLDNLPEKVEMESKHMLQKDSGNTQKIQGMTSKHNAKGSTKKTELKSKQTHNLIPMAMKNQQVVGAFKIPATQNEELMIGPPLQKASSEVIVQNGKALRRDLDGIKESKGFDKASIKIDKHDKSSAQKNLIRESQNDFQVIGRKQDHPNNSNREQKGAVKGRTNDPVLNNMLAQLEQERSEVKSSIQVEKEINGSIIQPEKRHTTKHILNNEKKSRNHLGFQKSYILSKNGPQEEKHNREQQLQQREEQMLMMTPQGGSEMTPKNSSKHPHQLINPQKKQSSINQATLFKKNSGENVAAMKSEGFLSSHYDDHDLVRDEASKDIDDKVKEIINRKSGQISSPRDQEFERAKGRHGVKTLKDEKHVHKLASKKIKNTRKQRVDMPGKIDQMLTGRNGAKLIAELGKQQVPNLQEARDRASDKFNVLNGAEEESAGMFKEANARIMSSNEPVAVVEPLDVRRQPHKEAELPPTLYGSSGGKLQSQQESLVSLPNDLHYQDVQTVAINLQDQAVAVAADEGFKTGEIAFHKTNGILEDRMGINQSQPQYHNTFEINIQQPLTDSENCLKWILVMSQLFVNTAEALFRLNIPFSVLQGSGQDIQDQGSKLILDCGYEVMKRKGIRQELKVHTCSRISISTVQIRSLDDLVRQLNEDMEKLKFYGRKKSSQVDVEDYLPKMLEHDVYDKDPDIDCMWDLGWNDETFAFIEKYDVIRDTEKHILSILLDEITGDCCMY* 1134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00008 1133 Coils Coil 290 310 - -
Rops2g00008 1133 MobiDBLite consensus disorder prediction 1 20 - -
Rops2g00008 1133 Coils Coil 812 832 - -
Rops2g00008 1133 PANTHER OS01G0228800 PROTEIN-RELATED 69 1131 - -
Rops2g00008 1133 MobiDBLite consensus disorder prediction 347 390 - -
Rops2g00008 1133 MobiDBLite consensus disorder prediction 596 620 - -
Rops2g00008 1133 Coils Coil 573 593 - -
Rops2g00008 1133 MobiDBLite consensus disorder prediction 594 622 - -
Rops2g00008 1133 Pfam DUF761-associated sequence motif 392 409 IPR032795 -
Rops2g00008 1133 MobiDBLite consensus disorder prediction 421 437 - -
Rops2g00008 1133 MobiDBLite consensus disorder prediction 520 567 - -
Rops2g00008 1133 MobiDBLite consensus disorder prediction 347 394 - -
Rops2g00008 1133 MobiDBLite consensus disorder prediction 530 547 - -
Rops2g00008 1133 MobiDBLite consensus disorder prediction 658 682 - -
Rops2g00008 1133 MobiDBLite consensus disorder prediction 413 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00008 Rops-Chr2 132944 138444 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00008 61 463 TRM (TON1 Recruiting Motif) Superfamily AT5G42710 36.145 1.73e-49 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00008 - - lja:Lj0g3v0352539.1 1519.98