Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00004 ATGAGGTGGTGCAGTGAGGTTATCTCAGTCTCAGGTGCACATGCACTCGCTCCTACAGTTGCCGCTTCCTTCCGCAACACAAGTGTTGTGTTCCAATTCCAAAAGCCTTTCTTCAAATTCAAATTCAAATTCAATTTCAACTTCAACAACTCCTTTTCTTCTCTCTCTGTTAACCATCGGAAGCTGTTGGCTGCTCAATCACAACCTTCAAGTTCAAGGGACGATTCTGATTTTGTGGTCGTCAATTTCTACCATTTTGTGTTCATCGAAGACCCACAAGCAGAAGTCGCCAAACACCTTTCTTTCTTGGACTTGGAGGAAGAATTACTGGTGCTAAATCAGCTTCTTCATGAATGCTTTCACCTGGATGCTTCAACAATGGGTCTCGACATCCATGGAAGAGTCTATTTGAATGAACAGGGGATTAATGCGCAGTATAGTGGGCCATCAAAAGATGCTCTGGCATATGTCAACTGGTTGAAAGAGGATAACAGGTTTTCTGACATCCTGGTTCAGATATCTCCATCAGAAAATGGACATACCTTTCCAACATTGAAGTTGCGGTATAAGCCTTCATTAGTACAGTTGGAAGGTGGCATATCACATCTTCCATTGCTTGATCCTTCGATGCGGGCAATACCTTTAGCACCTTCAGAATGGAGATATAGACTTGAAGCAATCAATAAAAATGATCTTCTGTCAAAAGATTATCCTGACAGAGATTTCATTCTATTGGATGTGAGAAATGGTTATGAGTGGGATATTGGACATTTTCATGGGGCTCAGAGACCTAATGTGGACTGCTTTAGGAGCACTTCATTCGGACTGTCTCAGAAAGAGATCATGGCTTCAGATCCTTTATCAAATGTAGATAAAGAAAAAGCAAGCATATTGATGTATTGCACTGGAGGGATTCGATGTGATGTGTATTCTACAATACTAAGGCAGCAGGGATTTCAGAATTTGTATACCCTCAAGGGAGGTGTTTCTCACTATTTAAAAAATGAAGGTCCTGCGGAATGGGTTGGACATTTATTTGTATTTGACTCCCGTCTGTCTCTCCCTCCTTCTGTTTACCATCCCCAGGCCTCCACTGAAGCAGTGACGGCTCCAGTTTCTGGAGATGACAGGTTTGCAAAATGCTACATATGTAGCTTGGAAGTCAGTGAATTGAGACATAGGAACTGTGCAAATCTTGACTGTAATTTACTTTTTCTATGCTGCCGGAAATGTGTAAAGGATCTAAGAGGATGTTGTTGTTTGACTTGCACTACTGCTCCTCGGCTAAGACCTGTTTTAAATGGAGATCAGAGATACAAAAAATGGCACATCTATCGAGATATAGATTTGCAAGACAAGATGAGAATTTCAACTTGA 1377 0.4139 MRWCSEVISVSGAHALAPTVAASFRNTSVVFQFQKPFFKFKFKFNFNFNNSFSSLSVNHRKLLAAQSQPSSSRDDSDFVVVNFYHFVFIEDPQAEVAKHLSFLDLEEELLVLNQLLHECFHLDASTMGLDIHGRVYLNEQGINAQYSGPSKDALAYVNWLKEDNRFSDILVQISPSENGHTFPTLKLRYKPSLVQLEGGISHLPLLDPSMRAIPLAPSEWRYRLEAINKNDLLSKDYPDRDFILLDVRNGYEWDIGHFHGAQRPNVDCFRSTSFGLSQKEIMASDPLSNVDKEKASILMYCTGGIRCDVYSTILRQQGFQNLYTLKGGVSHYLKNEGPAEWVGHLFVFDSRLSLPPSVYHPQASTEAVTAPVSGDDRFAKCYICSLEVSELRHRNCANLDCNLLFLCCRKCVKDLRGCCCLTCTTAPRLRPVLNGDQRYKKWHIYRDIDLQDKMRIST* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00004 458 ProSiteProfiles Rhodanese domain profile. 238 341 IPR001763 -
Rops2g00004 458 CDD RHOD_YceA 215 334 - -
Rops2g00004 458 Gene3D - 66 194 - -
Rops2g00004 458 Pfam Rhodanese-like domain 239 333 IPR001763 -
Rops2g00004 458 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 71 444 IPR020936 -
Rops2g00004 458 SMART rhod_4 227 338 IPR001763 -
Rops2g00004 458 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 207 354 IPR036873 -
Rops2g00004 458 Gene3D - 208 367 IPR036873 -
Rops2g00004 458 Pfam Rhodanase C-terminal 343 424 IPR022111 -
Rops2g00004 458 Pfam UPF0176 acylphosphatase like domain 128 191 IPR040503 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00004 Rops-Chr2 54192 74857 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00004 74 452 Sulfurtransferasese or Rhodanese AT1G17850 63.239 1.38e-179 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00004 - - gmx:100814358 681.404