Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02480 ATGAAATCCTTGCAATCCGGCATGGAACCAGAAAACTACAAACGGCCGGCGACTCAGCTTCTGGAGTTACCGGCGGCAAAGAAGCGGATGGTGCTGGGAGATATCACCAATTGTGGCAGTAAAATCATGACGAATAAGAAGAAGACAGAGAAGTTCAGTCAGCCCCGTTCCTCTTCCTCTTCCTCTTCCATGTACAAACACCTTCATGCTATGGAGATGGAGGCGAATAAGAGGCCATTGGCCAATTACACAGAGACAGTGCAGAGAGATGTTTCAAAGAAGATGCGTGAAATTCTTGTGGATTGGTTAGTGGAGGTTGCTGAGGAATACAAGCTTTCTTCTGATTCCCTTTACGTCGCCGTTTCTTGCGTTGATCGCTTCCTATCAATTCGTCCTATCCACAGGAACCAACTCCAGCTTCTCGGTGTTTCTTCCATCCTTATTGCCTCGAAAAATGAAGAGATCAGTCCTCCACATCCCGAAGACTTGTGCTACATAACAGATAACACTTACACAATCTCAGAGATTATCCATATGGAGAGGGAGGTCCTTGCATCCTTGAACTTTGACTTGGGCTATCCCACCCCTAAAACTTTCCTCAGAATTTTTATCAGAGCTGCTCAGAAAAATTTCCAGCATTGCAAGCAGCAATTGGAATTCTTGGCTTCCTATCTTCTCGAACTATGCCTCTTAAACTATAACTGCATCAAGTTCTTACCATCCGTGGCTGCCGCATCCGCTTTATTTCTATCCAGATTTATAATCGAACCAAACCAGCATCCTTGGAACCTGCCGTTACAATCTCAAACTGGTTATAAGCCATGTGACCTGAAGGAATGTGTCCTTGCCATACATGCGGTGCACTCGGTCATCACCGAAAGCCCTTTACAAGGAATACGAGAAAAATACTTGCAGCACAAGTTCACTTGTGTAGCATCTTTGACGGCTGGGGAAATTCCCGCAAGTTATTTGGAGCCCATTGATGGATAA 990 0.4515 MKSLQSGMEPENYKRPATQLLELPAAKKRMVLGDITNCGSKIMTNKKKTEKFSQPRSSSSSSSMYKHLHAMEMEANKRPLANYTETVQRDVSKKMREILVDWLVEVAEEYKLSSDSLYVAVSCVDRFLSIRPIHRNQLQLLGVSSILIASKNEEISPPHPEDLCYITDNTYTISEIIHMEREVLASLNFDLGYPTPKTFLRIFIRAAQKNFQHCKQQLEFLASYLLELCLLNYNCIKFLPSVAAASALFLSRFIIEPNQHPWNLPLQSQTGYKPCDLKECVLAIHAVHSVITESPLQGIREKYLQHKFTCVASLTAGEIPASYLEPIDG* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02480 329 Gene3D - 65 313 - -
Rops1g02480 329 Gene3D - 79 192 - -
Rops1g02480 329 FunFam Cyclin A1 181 313 - -
Rops1g02480 329 PANTHER CYCLINS 57 297 IPR039361 -
Rops1g02480 329 SMART cyclin_7 101 185 IPR013763 -
Rops1g02480 329 SMART cyclin_7 202 286 IPR013763 -
Rops1g02480 329 ProSitePatterns Cyclins signature. 96 127 IPR006671 -
Rops1g02480 329 Pfam Cyclin, C-terminal domain 194 315 IPR004367 -
Rops1g02480 329 SUPERFAMILY Cyclin-like 193 315 IPR036915 -
Rops1g02480 329 SUPERFAMILY Cyclin-like 68 191 IPR036915 -
Rops1g02480 329 SMART Cyclin_C_2 194 322 IPR004367 -
Rops1g02480 329 Pfam Cyclin, N-terminal domain 66 191 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02480 Rops-Chr1 47851140 47854585 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g02480 27 328 Core Cell Cycle Gene Families AT5G43080 49.074 1.07e-104 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02480 K06627 - cave:132177369 329.717