Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02455 ATGAGGGGAAACGGTAACAACGATGAGCGATGGACAGGGACGGGAGGGATCAGGAAGAAGGGGACGGGGGTGAGGGCGTGGCTGGTTCTTGATGGCAGCGGTGAGACTCAGGTGGTGGAGGCAGGGAAGCACGCCATCATGCGGCGGACTGGTCTCCCCGCACGTGACCTCCGCATCCTTGACCCTCTCCTTTCATACCCTTCCACAGTTTTGGGCCGTGAGAGAGCCATCGTCATCAATTTGGAGCACATCAAAGCCATCATCACAGCACACGAGGTTCTCCTCCTCAATTCCAGGGACCTTTCCGTCACCCCTTTCGTCGACGAGCTCCGCGCCAGGATCCTCCGTCATCACCACGCCACCACTCCCCATCATCCAGACTCTTCCGCCGACCCTAAACTCATACAACCAAATCAAGATCCAGATGGCATGAAGGTCCTCCCTTTCGAGTTCGTAGCCCTCGAGGCTTGCCTGGAGGCTGCTTGCAGCGTCTTAGAAAACGAGGCAAAGACGTTGGAGCAGGAGGCTCATCCCGCCTTGGATAAGCTGACTTCTAAGATCAGTACTCTGAATTTGGAACGCGTTCGTCAAATTAAGAGCCGATTAGTTGCGATCACTGGTCGTGTTCAAAAGGTAAGGGATGAATTAGAGCACTTGCTGGATGACGATGAAGATATGGCTGAGATGTATCTCACGGATAAGCTAGTTCAACAGCAGTTGGACAGTTCTTCTGCCTCATCCATTAATGATGATGGCAACGATATAGATAATGTTCTTCAACCAGATATAAATGACAGTTGTTTTAGGAATCCTGCTGAGATATCATTGGAAACTGGTGGAGCCACTGCAAGTCACGCGGATCATCAAAATGCTGACAACTCCGGAGACCATATGTTTGGTGCATCTCATGGACTTAGTAGGGACAACCATGGAACCCGTGCTAGCACCACCTACAGTGCCACAACCAAACAACTTGATGTGGAGGAGCTTGAGATGCTCTTAGAAGCATACTTCGTGCAGATTGACGGCACATTGAACAAGCTATCTACGCTGAAAGAGTACGTTGATGACACAGAGGATTACATTAACATTATGCTGGATGACAAACAGAACAATCTCCTCCAAATGGGAGTCATGTTGACCACGGCAACTCTGGTAGTAAATGCCGGCATTGTTGTTGCAGGTATTTTTGGCATGAATATTCATATTGAACTGTTTGATTCAAATTTATATGGGATGAGAGAGTTCCTCTGGACTGCTGGTGGCAGCACTGCTGGGACCATACTCTTGTATGTGGTTGCCATTGCCTGGTGCAAGCACAAACGCTTGCTGGGGTAA 1338 0.497 MRGNGNNDERWTGTGGIRKKGTGVRAWLVLDGSGETQVVEAGKHAIMRRTGLPARDLRILDPLLSYPSTVLGRERAIVINLEHIKAIITAHEVLLLNSRDLSVTPFVDELRARILRHHHATTPHHPDSSADPKLIQPNQDPDGMKVLPFEFVALEACLEAACSVLENEAKTLEQEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDEDMAEMYLTDKLVQQQLDSSSASSINDDGNDIDNVLQPDINDSCFRNPAEISLETGGATASHADHQNADNSGDHMFGASHGLSRDNHGTRASTTYSATTKQLDVEELEMLLEAYFVQIDGTLNKLSTLKEYVDDTEDYINIMLDDKQNNLLQMGVMLTTATLVVNAGIVVAGIFGMNIHIELFDSNLYGMREFLWTAGGSTAGTILLYVVAIAWCKHKRLLG* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02455 445 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 12 444 IPR039204 -
Rops1g02455 445 FunFam Magnesium transporter MRS2-1 15 98 - -
Rops1g02455 445 CDD Mrs2_Mfm1p-like 27 443 IPR039204 -
Rops1g02455 445 Coils Coil 155 175 - -
Rops1g02455 445 Gene3D Magnesium transport protein CorA, transmembrane region 103 373 - -
Rops1g02455 445 MobiDBLite consensus disorder prediction 280 314 - -
Rops1g02455 445 Gene3D - 16 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02455 Rops-Chr1 47560904 47566555 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g02455 27 444 MRS2 Gene Family AT3G19640 64.494 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02455 - - vvi:100258345 597.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g02455 1 47560904 47566555 Rops1g02455 1 47560904 47566555 ECH