Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02452 ATGAGGGGAAACGGTAACAACGATGAGCGATGGACAGGAACGGGAGGGATCAGGAAGAAAGGGACGGGGGTGAGGGCGTGGCTGGTTCTTGATGGCAGCGGTGAGACTCAGGTGGTGGAGGCAGGGAAGCACGCCATCATGCGGCGGACTGGTCTCCCCGCACGTGACCTCCGCATTCTTGACCCTCTCCTTTCATACCCTTCCACAGTTCTGGGCCGTGAGAGAGCCATCGTCATCAATTTGGAGCACATTAAAGCCATCATCACAGCACACGAGGTTCTTCTCCTCAATTCCAGGGACCCTTCCGTCACCCCATTCGTGGACGAGCTCCGCGCCAGGATCCTCCGTCATCACCAGGCCACCACTCCCCATCATCCAGACTCTTCCGCCGACCCTAAACTCATGCAACCAAATCAAGATCCAGATGGCATGAAGGTCCTCCCTTTCGAGTTTGTCGCCCTCGAGGCTTGCCTGGAGGCAGCTTGCAGTGTCTTGGAAAACGAGGCAAAGACGTTGGAGCAGGAGGCTCATCCCGCCTTGGATAAGCTGACTTCTAAGATCAGTACTCTGAATTTGGAACGCGTTCGTCAAATTAAGAGCCGATTAGTTGCGATCACTGGTCGTGTTCAGAAGGTAAGGGATGAATTAGAGCACTTGCTGGATGACGATGAAGATATGGCTGAGATGTATCTCACGGATAAGCTAGTTCAACAGCAGTTGGATAGTTCTTCTGCTTCATCCATAAATGATGATGATGAAGGGGACGACATGGAGAATCTTCTTCAACCAGACATAGATGACAGGAATCCTCATGAAATATCATTGGAAACTGGTGGAGCTACTGCAACTTATGAGGATCATCAAAATGCTGACAACTCCGGGGACCATATGTTTGGTCCATCTCATGTACTTAGCAGGGACAGCCATGGAACCCGTGCTAGCACCACCTACAGTGCCACAACCAAGCAACTTGATGTGGAGGAGCTTGAGATGCTCTTGGAAGCATACTTTGTGCAGATTGACGGCACATTGAACAAGCTGTCTACGCTGAGGGAGTACGTTGATGACACTGAGGACTACATCAACATTATGCTGGATGACAAACAGAATCATCTCCTCCAAATGGGAGTCATGTTGACCACTGCAACTCTGGTAGTAAGTGCCTTTGTTGTTGTTGCCGGTATTTTTGGCATGAATATTCATATTGAGCTGTTTGATTCAAATTTATATGGGACGAGAGAGTTCCTCTGGACTGTTGGTGGCAGCACTGCTGGGACCATATTCTTGTATGTGGTTGCCATTGCCTGGTGCAAGCACAAACGCTTGCTGGAGTAA 1335 0.5004 MRGNGNNDERWTGTGGIRKKGTGVRAWLVLDGSGETQVVEAGKHAIMRRTGLPARDLRILDPLLSYPSTVLGRERAIVINLEHIKAIITAHEVLLLNSRDPSVTPFVDELRARILRHHQATTPHHPDSSADPKLMQPNQDPDGMKVLPFEFVALEACLEAACSVLENEAKTLEQEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDEDMAEMYLTDKLVQQQLDSSSASSINDDDEGDDMENLLQPDIDDRNPHEISLETGGATATYEDHQNADNSGDHMFGPSHVLSRDSHGTRASTTYSATTKQLDVEELEMLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFVVVAGIFGMNIHIELFDSNLYGTREFLWTVGGSTAGTIFLYVVAIAWCKHKRLLE* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02452 444 Gene3D - 16 98 - -
Rops1g02452 444 FunFam Magnesium transporter MRS2-1 15 98 - -
Rops1g02452 444 Coils Coil 155 175 - -
Rops1g02452 444 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 12 443 IPR039204 -
Rops1g02452 444 Gene3D Magnesium transport protein CorA, transmembrane region 103 372 - -
Rops1g02452 444 MobiDBLite consensus disorder prediction 240 316 - -
Rops1g02452 444 CDD Mrs2_Mfm1p-like 27 442 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02452 Rops-Chr1 47511815 47514482 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g02452 27 444 MRS2 Gene Family AT3G19640 66.816 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02452 - - vvi:100258345 620.928