Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02438 ATGACAATAAGTTCATTCATATATCTTTCACTATTGTCATTAGTGGCATTGTTGCTTTCATATGGAATCTATGTGTGTGAGGGTCAATATCCTGAGGCTCTCCCTCCAACAGCAGAGAACTGTAATGGGGTTTTCATTTCCTACGACTTTCATACCCGAACGAAGGAATTCCCTCGTGTCAAGAATGCCACAGCACAATCATGGGCCTTCAATGCCACCGCAACAGTCCTCAACACAAGCAAGGATGTGATCAAAGCTTGGAAGCTGTTCATAGGGTTTCAACATGATGAGATTCTAGTCTCTGCCTCTGGAGCTATTCTGTTAGATGGAGGTGACTTCCCTGCTGAAGTTGGAAATGGTACTAGCTTAGTTGGAGCTTCTTCACCAGATTTGGAAAGCTCCATCAACACAGCCAATGATCTTAGCCAAATTCAAGTGCAGATTCAACTTGCTGGCACCATGTTTGGGATTAAGCCTCCAGGAATTCCTATGCCTAAAACCATAAAATTGGTAAATGATGGATACAAGTGTCCCCATCCAAGCATGCGTAAGAGTTCCATGTGGGCATGTTGTAAAAAAGACCCGAAATACAAGTCCACGCCTTCGAAGACAAAGTTCTTGCCTCGCCAGAAAGGGGATCTTACCATAGCCTATGATGTTCTTCAAGTGTATGCAAATAACTATCAAGCTCAAGTGACCATGGAGAATCATAGCCCTCTGGGGAAGTTAGATCATTGGAACTTGACCTGGGAGTGGACAAAAGGGGAATTCATTTACAATATGAAAGGCGCTTTCACGCGTGACATAGAATACTCAGGTTGCATCTTTGGTGCTGCAGGAGATTACTACAAGGAAATGGATTTCTCTAAAGTCATGAACTGTCAAAAGAATCCAGTAATAAGTGACTTGCCTCCAGAGAAATCCAATGATACCGAAATTGGAAGAATACCTTTCTGCTGCAGAAATGGCACTATTTTACCTCCCATTATGAATGCAACCCAAACCAAGTCTGTTTTCCTGATGCAGGTGTTTAAAGTTCCACCTGATTTGAATAAAACAGCTATTCACCCTCCAGAGAAATGGAAAATAATGGGAGTTCTTAACCCGGAATACAAATGTGGGGCAGCTCTGAGAGTGGAACCTGCACGATTTCCAGAGCCTAGTGGACTTGATGCTTCTGTTTATGCTATTTCAAGTTGGCAAGTAGTCTGCAATATCACTAAGCCAACCAAGAGGCACACTCGCTGCTGTGTCTCTTTCTCTGCTTTCTACAACGAGTCTGTGGTACCATGCAATACATGTGCCTGTGGTTGTGGTGATAACACAGACCATTGTAATCCAGATGCACGAGCAATGCTTCTCCCTCCAGAAGCTCTTCTTGTACCTTTCGAAAATAGGACACTGAAGACAGTTGCTTGGGCCAAATTAAAGCACTTTCATGTCCCGAGGAAATTACCATGTGGAGACAATTGTGGAGTTAGCATAAACTGGCATGTAGTTTCGGATTACAAAGGTGGGTGGAGTGGCAGAATCACTATCTTCAATTGGGAGACTAACCATTTTGAGAATTGGTTCACTGCACTGCAATTCAAGAAGGCATCTGTTGGTTATGACAGAGTGTATTCCTTTAATGGGACATTGCTTCCAAGGCTCAACCACACTATTTTCTTGCAAGGATTACAAGGAACGAACTATTTGTTAGGTAAAGACAATGGAACAGACCCAAAGGTGCCTGGGAAACAGCAATCTGTTATTTCCTTTACAAAGAAATACACACCCAACATTCAAATATCAAAAGGAGATGGGTTCCCTTCAAAAGTCCTTTTCAATGGAGAAGAGTGTTCCCTTCCTTCCCAATTCCCTGCTAAAAATGGAAACCAACATAATGTAGATTCAGTATACCAAATGTTAGTCTTAGTTTTAGCTTTTACAATGAATCAAATACTGTTTTAG 1953 0.4214 MTISSFIYLSLLSLVALLLSYGIYVCEGQYPEALPPTAENCNGVFISYDFHTRTKEFPRVKNATAQSWAFNATATVLNTSKDVIKAWKLFIGFQHDEILVSASGAILLDGGDFPAEVGNGTSLVGASSPDLESSINTANDLSQIQVQIQLAGTMFGIKPPGIPMPKTIKLVNDGYKCPHPSMRKSSMWACCKKDPKYKSTPSKTKFLPRQKGDLTIAYDVLQVYANNYQAQVTMENHSPLGKLDHWNLTWEWTKGEFIYNMKGAFTRDIEYSGCIFGAAGDYYKEMDFSKVMNCQKNPVISDLPPEKSNDTEIGRIPFCCRNGTILPPIMNATQTKSVFLMQVFKVPPDLNKTAIHPPEKWKIMGVLNPEYKCGAALRVEPARFPEPSGLDASVYAISSWQVVCNITKPTKRHTRCCVSFSAFYNESVVPCNTCACGCGDNTDHCNPDARAMLLPPEALLVPFENRTLKTVAWAKLKHFHVPRKLPCGDNCGVSINWHVVSDYKGGWSGRITIFNWETNHFENWFTALQFKKASVGYDRVYSFNGTLLPRLNHTIFLQGLQGTNYLLGKDNGTDPKVPGKQQSVISFTKKYTPNIQISKGDGFPSKVLFNGEECSLPSQFPAKNGNQHNVDSVYQMLVLVLAFTMNQILF* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02438 650 PANTHER COBRA-LIKE PROTEIN 7 8 644 - -
Rops1g02438 650 Pfam COBRA-like protein 228 407 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02438 Rops-Chr1 47198156 47200193 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g02438 2 645 COBRA Gene Family AT3G20580 55.675 0.0 752
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02438 - - gmx:100799716 1035.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g02438 1 47198156 47200193 Rops1g02438 1 47198156 47200193 ECH