Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02427 ATGGTCAGGTTTATCCGCCAGGAGGCCGAAGAGAAAGCCAACAAGATCTCTGTCTCCGAAGAAGAATTCAACATCGAGAGGTTGCAGTTGGTTGAAGTCAACAGGAAGAAGTTGAATGCTTCTCGGATTAAAGTTCTTCAAGCTCAAGATGACTTGGTTAATAAAATGAAAGAAGCTGCGCCCAAGGAACTTTTGAATGTGAGCCGTGATCATCGTGTGTACAAGAACCTTGTAAAAGAGCTCACTGTTCAGGGTTTGCTGAGGCTGAAAGAACCTTCCGTCTTATTGCGATGCCGGGGCGTCGGTCGAAGTCGGAGAAGAAGCACGACGGCGAGAAGCAGCTCCGGCGGGATCCTTATGAGGTCCTTGACGTTTCACCAAACTCCACCGATCAGGAAATCAAAACCGCTTACTGGAAAATGGCACTCAAATACCATCCTGACAAGAATGCCAATGATCCTAAAGCAGCTGATATGTTTAAAGAGGTTACCTTTTCTTATAACATCTTGGCAGATCCTGACAAGCGTCGATGACTCAGCTGGCTTTGAGGCTGTTGAATCAGATAGCCAAGAGTTGGAGTTGGATCTTTCAAGTTTGGGTGCTGTCAATACAATGTTTGCAGCACTTTTTAGCAAACTTGGTGTGCCAATTAAGACAACTGTATCTACAACTGTTTTGGAAGAGGCACTCAATGGTTTAGTTACCATTCGTCCACTTCCATTTGGACAGTTTATAACTAGAAGGGTTGAGAAGCAATGTGCACACTTTTATTCAGTTACGATAACAGAAGAGGAAGCACGAGCTGGATTTGTTTGTCGAGTGCAATCATCAGACAAAAGCAAGTTCAAGTTATTGTATTTTGATCAGGAAGACAATGGTGGCTTAAGTCTTGCACTCCAGGAAGACAGTGCAAAAACTGGGGAGGTTACCTCTGCTGGAATGTATTTTCTTGGGTTTCCTGTTTATCGGTTGGATCAAACAATGAACTCTATAGCTGCTGCTAAGGATCCAGATACATCATTTTTCAGAAAGCTGGATGCGTTCCAGCCTTGTGAATTAACAGAATTGAAGGCTGGTACCCATGTATTTGCCGTTTATGGTGACAACTTCTTCAAAAGTGCAAACTATACAATAGAATCCCTGTGTAGCTCTCTGTTTGATGCGCCAACATGCCACGCTGCATGTAGCTTGCATGCAGGGACGTAG 1206 0.4403 MVRFIRQEAEEKANKISVSEEEFNIERLQLVEVNRKKLNASRIKVLQAQDDLVNKMKEAAPKELLNVSRDHRVYKNLVKELTVQGLLRLKEPSVLLRCRGVGRSRRRSTTARSSSGGILMRSLTFHQTPPIRKSKPLTGKWHSNTILTRMPMILKQLICLKRLPFLITSWQILTSVDDSAGFEAVESDSQELELDLSSLGAVNTMFAALFSKLGVPIKTTVSTTVLEEALNGLVTIRPLPFGQFITRRVEKQCAHFYSVTITEEEARAGFVCRVQSSDKSKFKLLYFDQEDNGGLSLALQEDSAKTGEVTSAGMYFLGFPVYRLDQTMNSIAAAKDPDTSFFRKLDAFQPCELTELKAGTHVFAVYGDNFFKSANYTIESLCSSLFDAPTCHAACSLHAGT* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02427 401 SUPERFAMILY V-type ATPase subunit E-like 51 108 - -
Rops1g02427 401 Gene3D - 56 122 IPR038495 -
Rops1g02427 401 Gene3D - 1 47 - -
Rops1g02427 401 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 178 387 - -
Rops1g02427 401 Pfam ATP synthase (E/31 kDa) subunit 37 99 IPR002842 GO:0033178|GO:0046961|GO:1902600
Rops1g02427 401 Coils Coil 2 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02427 Rops-Chr1 46966862 46968137 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g02427 1 99 Primary Pumps ATPases(2) AT4G11150 65.041 3.37e-40 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02427 - - gmx:100800929 381.719