Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02426 ATGCCAGAGTCACACGAGTTCTTCAATGCTATTAAGTACTTAGTTTCCCCTAGGAGATCTAAATACCGCCCACAAAATGCCAAGAAAGAAGAAGCTAAAGGGAACGATGTGAGTGTGAAGAGAATAAAGGAGTATAGGCAGAAGGTGGAATCTGAATTGTCTAATATATGCGGTGATATCATGACCGTTATTGAGGAGCACCTTATTCCCCCAAGCTCTGCTGGTGAACCTAGTGTGTTTTTCACCATGAAGGCATATCGCGGCTTCCATCGCGGCCCGGTGAGTTACCTCCCACACATCCCGGGGAGGCGGTAA 315 0.4698 MPESHEFFNAIKYLVSPRRSKYRPQNAKKEEAKGNDVSVKRIKEYRQKVESELSNICGDIMTVIEEHLIPPSSAGEPSVFFTMKAYRGFHRGPVSYLPHIPGRR* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02426 104 PANTHER 14-3-3 PROTEIN 8 84 IPR000308 -
Rops1g02426 104 SUPERFAMILY 14-3-3 protein 3 82 IPR036815 -
Rops1g02426 104 Pfam 14-3-3 protein 7 82 IPR023410 -
Rops1g02426 104 Gene3D - 2 87 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02426 Rops-Chr1 46966048 46966854 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g02426 12 81 14-3-3 family AT2G42590 58.333 8.59e-23 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02426 K06630 - gmx:100807980 105.531