Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02424 ATGATTTGCTCCAAGCATCACCTCTTGGAGGGCAGTTCTTGCTGTCGTTGGAGAGGTGATACAGCTACAAAGGAAGCATTATACGCGACAAAATGTGGTCATCAACATGGGTCTGGCACTGGAAGCACAGCTCAAGTTGAGGTTGGCAGAGGGGTGGCAACTGATAATTTAAGTCAGCATCAAGCAAGACTTCAAGATGCTGCTGCAGCAGCTGCAATATATGAGAAGTTTTATGTTTATCCCGCTGCAACTTCTTTTGTCGGGTCGCATGGTTACACTCTTTATCCCCCGGCTCAAAGGTCTGTGGCTGAATCATCTAGCACCGAGCTTAAAGGAGAACAAGCATCCAGTGAGGAAACACAGAAGCAGTGTATGATCCCTGGTTCCTCCAGTGCAAAACTTCTATTTTCTACCTTCCCAACTGTAATGCACATCGCAGCCGCTATGGAAATAAACTCAAGACTGATCCCTAGCTTGAAGACCTTACATGCTACACTGAATTCAAAACGAACCACAAGCTGTAATGCCATCGTCATTACTATCTACTGA 549 0.4572 MICSKHHLLEGSSCCRWRGDTATKEALYATKCGHQHGSGTGSTAQVEVGRGVATDNLSQHQARLQDAAAAAAIYEKFYVYPAATSFVGSHGYTLYPPAQRSVAESSSTELKGEQASSEETQKQCMIPGSSSAKLLFSTFPTVMHIAAAMEINSRLIPSLKTLHATLNSKRTTSCNAIVITIY* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02424 182 MobiDBLite consensus disorder prediction 104 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02424 Rops-Chr1 46908720 46912338 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g02424 35 105 C3H Transcription Factor Family AT1G65040 41.975 8.01e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02424 - - gmx:100816441 95.1301