Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02420 ATGGCTTCTTCCACCAACAAAGAGATAGAGAAAGAGCTTCTTCCCCTTATCCGTGTCTACAAGGATGGCACCATAGAACGTCTCCTAGGCTCTCCAAATGTGCCACCCTCCCCTCAAGACCCTGAAACCGGTGTCTCATCCAAAGACATTGTTATCTCAGATAACCCCTTCGTCTCTGCTCGTATTTTCCTTCCAAAATCCCATCAAAACAAGAGCCACAAACTCCCCATCTTTGTCTACTTTCACGGTGGTGCGTTTTGCGTTGAATCAGCCTTTTCCTTTATCTACCACCGCTACCTCAACCTCTTAGTCTCCGAAGCAAATATAATAGCCGTGTCTGTAGATTACAGACTCCTTCCACACCACCCTGTTCCTGCACCTTATGAAGATGGTTGGACAACTCTCCAATGGGTTGCTTCTCATTTCACCAATAACCCCACCAACAAGGAGCCATGGTTACTCGAACATGGTGATTTCAACAAGGTTTATGTAGGAGGTGACACAAACGGTGCTAACCTTGCTCATAACTTGGCTGTGCGTGCTGGCACTGAAACCTTACCTGGGAATCTTAGAATATTGGGTGCCTTACTCTGCTGCCCATTTTTCTGGGGTTCCAAGCCAATTGGGTCTGAACCCGTTGAGGAGCATGAGCATAGTTTGGCCATTAAGGTGTGGAACTTTGTGTATCCAAATGCACCTGGTGGAATTGATAACCCCATAGTCAACCCTTGTGCTCCTGGAGCACCCAGTTTGGCTACACTTGGGTGCTCTAAGATACTACTTACTATTACTGGCAAGGATGAGTTTAGAGACAGAGACCTTTTGTATTACGAGTCAGTGAAAAAAAGTGGGTGGCCAGGTGAATTGGAACTGTTTGATGCGGGAGATGAGGCACATGCTTTCCAGCTATTCAATCCCGAAACTGATAGGGCCAAAGCCTTGATCAAACGCCTGGCTTCTTTTCTAGTGTGA 972 0.4671 MASSTNKEIEKELLPLIRVYKDGTIERLLGSPNVPPSPQDPETGVSSKDIVISDNPFVSARIFLPKSHQNKSHKLPIFVYFHGGAFCVESAFSFIYHRYLNLLVSEANIIAVSVDYRLLPHHPVPAPYEDGWTTLQWVASHFTNNPTNKEPWLLEHGDFNKVYVGGDTNGANLAHNLAVRAGTETLPGNLRILGALLCCPFFWGSKPIGSEPVEEHEHSLAIKVWNFVYPNAPGGIDNPIVNPCAPGAPSLATLGCSKILLTITGKDEFRDRDLLYYESVKKSGWPGELELFDAGDEAHAFQLFNPETDRAKALIKRLASFLV* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02420 323 Pfam alpha/beta hydrolase fold 78 301 IPR013094 GO:0016787
Rops1g02420 323 FunFam Probable carboxylesterase 12 16 323 - -
Rops1g02420 323 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 78 94 IPR002168 GO:0016787
Rops1g02420 323 Gene3D alpha/beta hydrolase 4 323 IPR029058 -
Rops1g02420 323 SUPERFAMILY alpha/beta-Hydrolases 9 322 IPR029058 -
Rops1g02420 323 PANTHER ARYLACETAMIDE DEACETYLASE 15 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02420 Rops-Chr1 46861154 46862347 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g02420 6 322 Carbohydrate Esterase AT3G48690 40.373 1.87e-81 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02420 - K13258 gmx:547489 524.628