Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02419 ATGGCTTCCCCAGTAGGCACCAACAAGAACAAGGAGATAGTTACAGAGATTCCCGGCTACATATATGTGTACAGTGATGGCACCATTGAACGTCCCGATAGCTACCCATTAGTTCCGCCATCACCAGAAGACCCTGCAACTGGTGTCTCATCCAAAGACATTGTCTTTTCAAAAGACCCTTATCTCGCTGCTCGACTTTTCCTTCCAAAACTAACCCAATCCAACGAGAATAAAAAACTCTCCATCTTGGTCTACTTTCATGGTGGCGCATTTTGCTATGAATCATGCTTTGCATTCCACCATACCAAATATTGCAACTTGTTAGCTTCTCAAGCAAACATTGTAATTGTTGCCATAGAGCACAGAAAAGCTCCAGAGTATTATCTCCCAACTGCTTATAATGATTGCTGGGATGGTCTCTATTGGGTTGCCTCTCATGCCACCCAAAACCCCACCAACCCTGACCCTTGGCTCATCAACCATGGTGATTTCAACAAAATCTTCATTGGGGGTGACAGCAGCGGTGGTAATATTGTTCATAATGTTGCCATGCGTGCTGGGGTTGAAGCTCTACCTGGTGGTGTTAAACTATATGGTGCTTATCTTAACCATCCTTACTTCTGGGGTGCAAAGCCAATGGGGAATGAACCTGTTATAGGGTTCGAGGAGACCAATCAGAGTAGGATTTGGAACTTCACGTACCCTTCTGCACCTGGTGGGTTAGATAACCCAATGATCAATCCATTGGCTCCTGGAGCACCTAGCTTGGCCACACTTGGGTGTGCTAAGATGATTGTTACTGTTGCTGGCAAGGATCGCCTTCACTTCAGGGACAGAGCAGTATGGTATTATGAGGCTGTGAAGAGCAGTGGGTGGAAAGGGGAAGTGGAACTGTTTGAAGAGGAAGACGAGGATCATGTTTATTACTTGTATGATCTTGAAACTGAGAAATCCAAAAGATTGATTAAAGTTGTGGTTGATTTTCTTCGCCAGTGA 996 0.4498 MASPVGTNKNKEIVTEIPGYIYVYSDGTIERPDSYPLVPPSPEDPATGVSSKDIVFSKDPYLAARLFLPKLTQSNENKKLSILVYFHGGAFCYESCFAFHHTKYCNLLASQANIVIVAIEHRKAPEYYLPTAYNDCWDGLYWVASHATQNPTNPDPWLINHGDFNKIFIGGDSSGGNIVHNVAMRAGVEALPGGVKLYGAYLNHPYFWGAKPMGNEPVIGFEETNQSRIWNFTYPSAPGGLDNPMINPLAPGAPSLATLGCAKMIVTVAGKDRLHFRDRAVWYYEAVKSSGWKGEVELFEEEDEDHVYYLYDLETEKSKRLIKVVVDFLRQ* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02419 331 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 83 99 IPR002168 GO:0016787
Rops1g02419 331 PANTHER ARYLACETAMIDE DEACETYLASE 16 313 - -
Rops1g02419 331 Gene3D alpha/beta hydrolase 24 331 IPR029058 -
Rops1g02419 331 SUPERFAMILY alpha/beta-Hydrolases 22 331 IPR029058 -
Rops1g02419 331 Pfam alpha/beta hydrolase fold 83 309 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02419 Rops-Chr1 46848278 46849273 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g02419 10 330 Carbohydrate Esterase AT3G48700 35.650 6.90e-65 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02419 - K13258 gmx:100814777 509.22