LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops1g02419	ATGGCTTCCCCAGTAGGCACCAACAAGAACAAGGAGATAGTTACAGAGATTCCCGGCTACATATATGTGTACAGTGATGGCACCATTGAACGTCCCGATAGCTACCCATTAGTTCCGCCATCACCAGAAGACCCTGCAACTGGTGTCTCATCCAAAGACATTGTCTTTTCAAAAGACCCTTATCTCGCTGCTCGACTTTTCCTTCCAAAACTAACCCAATCCAACGAGAATAAAAAACTCTCCATCTTGGTCTACTTTCATGGTGGCGCATTTTGCTATGAATCATGCTTTGCATTCCACCATACCAAATATTGCAACTTGTTAGCTTCTCAAGCAAACATTGTAATTGTTGCCATAGAGCACAGAAAAGCTCCAGAGTATTATCTCCCAACTGCTTATAATGATTGCTGGGATGGTCTCTATTGGGTTGCCTCTCATGCCACCCAAAACCCCACCAACCCTGACCCTTGGCTCATCAACCATGGTGATTTCAACAAAATCTTCATTGGGGGTGACAGCAGCGGTGGTAATATTGTTCATAATGTTGCCATGCGTGCTGGGGTTGAAGCTCTACCTGGTGGTGTTAAACTATATGGTGCTTATCTTAACCATCCTTACTTCTGGGGTGCAAAGCCAATGGGGAATGAACCTGTTATAGGGTTCGAGGAGACCAATCAGAGTAGGATTTGGAACTTCACGTACCCTTCTGCACCTGGTGGGTTAGATAACCCAATGATCAATCCATTGGCTCCTGGAGCACCTAGCTTGGCCACACTTGGGTGTGCTAAGATGATTGTTACTGTTGCTGGCAAGGATCGCCTTCACTTCAGGGACAGAGCAGTATGGTATTATGAGGCTGTGAAGAGCAGTGGGTGGAAAGGGGAAGTGGAACTGTTTGAAGAGGAAGACGAGGATCATGTTTATTACTTGTATGATCTTGAAACTGAGAAATCCAAAAGATTGATTAAAGTTGTGGTTGATTTTCTTCGCCAGTGA	996	0.4498	MASPVGTNKNKEIVTEIPGYIYVYSDGTIERPDSYPLVPPSPEDPATGVSSKDIVFSKDPYLAARLFLPKLTQSNENKKLSILVYFHGGAFCYESCFAFHHTKYCNLLASQANIVIVAIEHRKAPEYYLPTAYNDCWDGLYWVASHATQNPTNPDPWLINHGDFNKIFIGGDSSGGNIVHNVAMRAGVEALPGGVKLYGAYLNHPYFWGAKPMGNEPVIGFEETNQSRIWNFTYPSAPGGLDNPMINPLAPGAPSLATLGCAKMIVTVAGKDRLHFRDRAVWYYEAVKSSGWKGEVELFEEEDEDHVYYLYDLETEKSKRLIKVVVDFLRQ*	332

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops1g02419	331	ProSitePatterns	Lipolytic enzymes "G-D-X-G" family, putative histidine active site.	83	99	IPR002168	GO:0016787
	Rops1g02419	331	PANTHER	ARYLACETAMIDE DEACETYLASE	16	313	-	-
	Rops1g02419	331	Gene3D	alpha/beta hydrolase	24	331	IPR029058	-
	Rops1g02419	331	SUPERFAMILY	alpha/beta-Hydrolases	22	331	IPR029058	-
	Rops1g02419	331	Pfam	alpha/beta hydrolase fold	83	309	IPR013094	GO:0016787

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops1g02419	Rops-Chr1	46848278	46849273	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops1g02419	10	330	Carbohydrate Esterase	AT3G48700	35.650	6.90e-65	206

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops1g02419	-		K13258	gmx:100814777	509.22

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