Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02393 ATGGAATTTGCAAGTTGTGCACTGCTCCTTCTTTTGACGTGCACCACCATTCATGTCGTTTGCTCATTCCTTGCAAGAAGCAGGAAACCAAACTGCAAGCTTCCACCAGGACCCTCACCTCTTCCCATCATAGGAAACCTCTTAGAACTGGGCAACAAGCCCCACCAGTCCTTGGCCAAGCTTGCTAAGATTCACGGCCCTATAGTGAGCTTAAAGCTAGGCCAAGTTACCACTGTAGTGGTCTCTTCAGCTGAGATGGCCAAAGAGGTGCTCCTAACCCATGATCACCTATTGTCAAACCGAACCATTCCCCAATCAGTGTCAGTTCTCAACCACGAGAACTATAGCCTTGCCTTCATTCCCGTTTCGCCTCTTTGGCGAGACTTGAGGAAAATATGCAATGGTCATTTATTTGCACACAAAACTCTTGATGCCAGCCAAGAACTTAGGCTCATGAAAGTGCAACAACTCCTCAATGAAATCCGTCAAAGCAGCCAAATCGGTGAAGCTGTAGATATTGGAACAGCAGTTTTCAAGACTACCATAAATTTATTATCAAACACCATTTTCTCTGTGGATTTGGTTCAGTCTGCTGGTACAGCAGGAGAGTTCAAGGACTTAGTGACAAATATTACTAAACTTGTTGGAACACCAAACCTAGCAGATTATTTTCCTATCTTGAAAATGGTAGATCCACAAGGCATAAAAAGACGTCAAGCTAAGAACGTTGAGAAGGTGTTGGGCATTTTCGATCGCTTGGTTAACCAACGGTTGAAGCTGAGGAGGGAAGGCACAAATATTGATAGCCACAACGACATGTTAGACGCCCTTCTCAACATTTCTCAAGAGAACGAGATGATGGACAAAGCAATGATTGAACATTTGTCACATGATCTGTTTGTTGCGGGGACGGACACAACAACATCTACACTAGAATGGGCAATGACAGAGTTACTATGCAATCCAGAGGTAATGTCAAAAGCGATAAAAGAACTCGAGCTAACCATTGGGAGAGGTAATCCTGTAGAGGAATCAAACATTGCTAGACTTCCTTACTTGCAAGCTATAATAAAGGAGACACTCAGGTTGCACCCTCCAGTTCCATTTTTACTGCCTCGAAAAGCTGGGAGAGATGTGGACATATGTGGGTACACCATTCCAAAGGATGCACAAGTGCTAGTGAATGTATGGACTATTGGCAGGGATTCTAGCATATGGGACAATCCGAATTCGTTTTATCCAGAGAGGTTTCTGGAGTCAGAGATTGATGTTAAAGGCAGGAATTTTGAGCTTGCACCCTTTGGTGCTGGGCGGCGAATATGCCCTGGCATGATGTTGGCTATCAGGATGTTGCTGTTGATGTTGGGTTCATTGATCAACTCATTTGATTGGAAGCTCGAAGATGGTATGGGTTTAGAGGATGTGGATATGGATGACAAGTTCGGGATCACCTTACAAAAGGCTCAACCCTTACGAGTTGTTCCACTCAAAATCAACAATTTGATTTGA 1509 0.44 MEFASCALLLLLTCTTIHVVCSFLARSRKPNCKLPPGPSPLPIIGNLLELGNKPHQSLAKLAKIHGPIVSLKLGQVTTVVVSSAEMAKEVLLTHDHLLSNRTIPQSVSVLNHENYSLAFIPVSPLWRDLRKICNGHLFAHKTLDASQELRLMKVQQLLNEIRQSSQIGEAVDIGTAVFKTTINLLSNTIFSVDLVQSAGTAGEFKDLVTNITKLVGTPNLADYFPILKMVDPQGIKRRQAKNVEKVLGIFDRLVNQRLKLRREGTNIDSHNDMLDALLNISQENEMMDKAMIEHLSHDLFVAGTDTTTSTLEWAMTELLCNPEVMSKAIKELELTIGRGNPVEESNIARLPYLQAIIKETLRLHPPVPFLLPRKAGRDVDICGYTIPKDAQVLVNVWTIGRDSSIWDNPNSFYPERFLESEIDVKGRNFELAPFGAGRRICPGMMLAIRMLLLMLGSLINSFDWKLEDGMGLEDVDMDDKFGITLQKAQPLRVVPLKINNLI* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02393 502 Gene3D Cytochrome P450 24 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02393 502 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02393 502 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02393 502 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02393 502 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02393 502 CDD CYP76-like 62 495 - -
Rops1g02393 502 SUPERFAMILY Cytochrome P450 35 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02393 502 Pfam Cytochrome P450 35 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02393 502 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02393 502 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02393 502 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02393 502 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02393 502 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02393 502 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02393 502 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02393 502 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02393 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Rops1g02393 502 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 11 497 - -
Rops1g02393 502 FunFam Cytochrome P450 76C4 26 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02393 Rops-Chr1 46451077 46452722 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g02393 7 497 Cytochrome P450 AT2G45550 46.493 1.64e-159 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02393 - - gmx:100805772 740.339