Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02381 ATGATGATGGAGGGAACTGCTATTTCTTCCAAACCAGAAGCCAAAGAAGAGATCGTTGATTTGACTCAAATCTCTCTCCGAACTCTTCAGCTTTCTGACCTTGATGATCTCATGGTGTGGACCACTGATGAAAAAGTTACCAAGTTTTGCACATGGGAACCTCACAGCAGCAAAGATGATGGCATTAACTTCATCGAAAATATAGCAACCAAGTTCCTATGGTGCAAAGCAATATGTCTTAACGACCGTGCTATTGGATGTATTTCTCTGACCTCGTATTCAGCCCATGATAAATCGAGGAACAAATCCGCGGAACTTGGCTATGTTCTGGGGTCCAAATACTGGGGTAAAGGGATTGTCACGCTGGTTGTGAAACAAGCGGTTAAAGCCATATTCAGTGAGTTGCCACACTTGGAGAGGATTGAAGCTCTGGTTAATGTGGAAAATGTTGGGTCTCAGAGAGTGCTGGAGAAGGCTGGTTTCCAAAGGGAGGGAGTTCTTAGGAAGTATCTGTTCATCAAGGGAAAAAGCAGAGATATGGTCATGTTCAGATGA 555 0.4378 MMMEGTAISSKPEAKEEIVDLTQISLRTLQLSDLDDLMVWTTDEKVTKFCTWEPHSSKDDGINFIENIATKFLWCKAICLNDRAIGCISLTSYSAHDKSRNKSAELGYVLGSKYWGKGIVTLVVKQAVKAIFSELPHLERIEALVNVENVGSQRVLEKAGFQREGVLRKYLFIKGKSRDMVMFR* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02381 184 Pfam Acetyltransferase (GNAT) domain 25 162 IPR000182 GO:0016747
Rops1g02381 184 Gene3D - 9 184 - -
Rops1g02381 184 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 24 183 IPR016181 -
Rops1g02381 184 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 16 183 - -
Rops1g02381 184 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 24 184 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02381 Rops-Chr1 46220518 46221378 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Rops1g02381 Acetyltransf_3 1.6e-26 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02381 - - cam:101514530 283.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g02381 1 46220518 46221378 Rops1g02381 1 46220518 46221378 ECH