Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02354 ATGGTTTTAGTTCAGGAGATACTCAAACACAAATTGAAAGACCCAAATTTCTGCGATTCCAAATCAAATCCTAGGAGTCACTTCGCTGTTTATTGTCATCATAAGGTGTCACCTGAATCTGGAAAGAAGTTTGTCAAACATTACATGATTCAGAACACTGATATGAGGCTTGAATCAGGGACATGTAATGTGTGCTCAGCTCCTTGTTCATCGTGCATGCATCTTAACCATGCTCTGATGGGGTCAAAGGCTGAAGAGTTTTCTGATGAAAACTGTCGCTTAGGGGAAGCTAATAATCAGTTTTCTACAAATGAGGGTAATGTATGTTCTCTTAGGAGCAGATCTTGTGAAAGCTTGCAGCATGCTGTCAGTGAAACCAGTAATATGCTCAGTGTTAATTCAAGTCATGATTCTCTATCCGAAAATGCCGAGAGTAGGCAGATCTTGTCAAATAAGTATCAGGATTCCAAGCATTTAGAAGGTCATGATGACGACACATCTTGTATTAGTGGAGCCAGTGATGCTAACTTAGTGAATGATAGCCATCAAAGGAACGTGGAAAGAGTAAATATATCTTTTAGTTCAGCTTCAGTTAGTCATTTAGGGGCGGAGGGATCTGGAAGTGCACCATCGGTTGACATGTCTGGCTTGGAGATTCCTTCTTCTAAAGATGCAGACACTGGCCATAGCTCACCTAAGGTACAAAGGCTGTATGGACAATCTCGAAGTGGTAAATCTCTATCAAGTAATCCAGGCTTAATGCATGTGGAAAGGGATTCGTGCTCTCATATCCCAGAAAAGTTTTCAGAATGCTCTATTGAGAATTCTAGTTCATCATTAACCAAAGAGAGGGCACCTAATGTTGTTTCTGGTGAGAAACCTGTTGCCAATAATGACATCCTTATTGATGGTACTTCCAAGGTTTCACCAATAGTATGTCCAAAATCAGAAGCAGATACTGATAATGATGTATGTGATGCTAATGCTGAAGATCGTAAATGTTCTGTCCATGATGGACAGCATGAGAAAGCTGAAGACCTGGTTAAATCACCCGGCAAGCAGGAACCTCAATCTGAAGATGAGAGTGATGAATCAGATGTGGTGGAACATGATGTAAAGGTGTGTGATATCTGTGGAGATGCTGGCCGTGAAGATCTACTTGCCATATGTTGTAGGTGCAGTGATGGTGCAGAGCACACCTACTGCATGCGAGAAATGCTTCAGAAACTCCCTGAAGGGGATTGGTTATGTGAAGAATGCAAGGATGCAGAGGAGACTGAAAATAAGAAGCCGGATGTTGAAGACAAAAAAATCATTAAAGCTGGTTCAACTTCACAAGTTTCTGGCAAAAGACTTGCTGATAACATCGATGTAGCTCCTCCAGCAGCAAAAAGGCAAGCTGTTGAATTGAGCACAGGATCACCAAAAGCCACAAGCCCCAAGAGATTAGTTCCACTGTCACGAGAATCTTCATTTAGGAGCTTAGATAAATTAAAAGCGAAGCCTGCTCTTCTGATGCCTATTCGTAATCACTCTGGTGATGATGACACAGAGATTGCTCGTTCTCCATCCATTGGCCCACGGGGTCAGATTTCAAAGAGTATGTTGTTGAAGTCTAATTCATCCAAGAACTTAAATTCCAAGCCAAGAGTCAAACTTGTTGATGAAGTTGTTCTGCCGAAATCAAAAGGGGGTAATGAACATGCTTCTAAGAATGTGGAGATGCCTGCTCGGATGACAAGCAAATCAGCATTATTCAAATCCTCAAGTTTGGGCCGATCAACTGCAACTGAATCAAAAGTTAAAATGCTTTCACCTAAGTCTGCAACTGCTCAGGAATTGAAAGGGTCTAGACATTTAAAAGAATCAAGTGCATTTGACAGGAAATTTCTGTCTAGGATTGATCGGCCTGTGGCTAGTTCTGTTGTTTCCACGCCTAAGGGTGATCAGAAGCTTACACCTCGTGGTGAAACCACTAAACCTTCAGCAGTTAACAACAATCGAGAATTAAAGGTTAATCAGGATGGAAAATTAAGTGTGTTATCAAAGTCTATGAGTAATGTAAGTCGCAAAAGTTTGGAGCCTCAAGTTAGTTCAGAGAGAACATCAACCAATATTGATGAAGCTCTACAGGATGTGCTGCCTCGATCACGAGAGACAGCAAATCAGGTTGAGAAAACCAGAGACGGTTCTTGTGATCATGTAAGGTCAGCTGTTCCTACTGCTTCAAAAGGACCATTCTGTCAAAAATGTAAGGAATTCGGCCATTCTCTGGAACATTGCACCGCTGGTACTACACAAGAATCTGGTGTTGAAATATCTGTCACTGCCTCAAAGAGTTCGAAAGAGGGGATGCATAAAGGCAATAGATTGAAAGCTGCAATCCAGGCTGCTTTACTTAAAAGACCTGAAATTTACAAGAAGAAAGATGTACCTAATCAAACTGATGAAGTTTCTACATCGGGCACAGAGTTGAATTGTGAAGTGACTTTGCAAGACCAAGTGTTGGTTTCTAGCACGCTGAAGAATAGTATATCTGCTGAAGAAACCCATGAACAAAAGGAAATCCTTGAGAATTCTACATTTGATTCTTCCAAATGTTCATCTGCTAGTGATTTGAAGCAACTTAACTCTTGTCCAACTGATTTTTGTTCCCAACCAGGAAAGTCAGATTCAATTGGTGTTACTGCTGGAAAGCCTTTAGTGAGAGACTTGTCAAATAAAGCTTTGGCAATCTCAAGTGTTCTTTCAAAGATGTTGGCCTTTCCTGAATATGAATACATCTGGCAGGGTGTCTTTGAAGTGCATAGAAATGGAAAACCTCCGGACTTATGTAATGGAGTTCAAGCACATTTATCCTCTTGTGCTTCTCCTAAGGTTCCTGAGGTAGTGACCAAGTTTCTACCCAAAGTTCCCCTCAATGAAGTTTCTCGCTTGAGCACATGGCCTTTACAATTTCATCATGGTGGTGCTAGAGAAGATAATATTGCTCTTTACTTCTTTGCCAGAGATGTTGAAAGTTATGAGAGATACTACAAGGGTCTATTGGATCACATGATTAAAAATGATTTAGCACTTAAAGGAATTTTTGACGGTGTTGAACTTCTCATATTCCCATCCAATCAGCTTCCTGAAAATTCACAGCGCTGGAATATGTTGTTTTTCTTGTGGGGTGTATTTAGGGGGAGGAGGATCAATCATTCAGATTCTGCAAAGAAGATTTGTATTCCCTGTTTGAATGCAGTGCCAGTTGTGGAGAATTCATCAACTGCTGTTGTGACTTTGTCTGAAACACACTGTTCGCCAAAGTGCATGGATGAAGAATCAATTAATTGTGATAAAGCATGCAATGCACTTCTCCCATCTACTTCCTTAGACCAATGTCAGATTACTGTAAGTAGGAATATTGATATCAACCAACAGACACATTTGGGTCCGCAAGTAAGCTTGGAGAAGCGAGATAGTAGAATTGACACCAAATCGACATCAAGTGTTCCAAGAAGCAGTACTCAGTTATGTCAAGCAATGAAATCTGCTAGTTCATCCCTGAATGCTAGTGTACTAGAACATGGACAGTGCAGAGTCTCTAAACCTCCTGAAGCAATGGGAACAAGTGTAAGTAGTAGGATTGTGGAAACAAAAACTGATTCTGATATTTCTGTCAAGCAAGAGAATGTCCTGTCTTCGGCGATTCCTTCGGTTGACAATCAAGAAAGAGGTGCTGCAAGTGATACAAGTAAGGGTGAAATTTTGGACAGAATGAACAGTGATGAGGAGCAGCAAACAACCAAGAGGAAACAGAAAGAAGATTGTCGCTATATTGATTTGGAGGAAACTATTGACAATCAAGAAACAGGTGCTGCAAGCAATATTAGTGAGGATAAAATTTCAGAAAGAATGAACAGTGATGAAAATCAGCAAAGGCCTAAAAGGAAACAGAAACATGATCACTATATTGACTTGGAGGAAACTGTTGAAAATCAAGAAACAGTTGCTGCAGGCAATATTGGTAAGGATGAAATTTCAGAGAAAATGGATGGAAATGATGATCAGCGACAGCTTAAGAGAAAACTGAAAGAAGATGATTGCTATATTGACTTGGAGGCAACTTTTCAGGAAGACCCATCAGTAGAAGTGATCAAGTGTCAGCTACCCAATGATAAAGAAGTCCAGCATGTAGATCTTTCTGAATCGGTGTTGCAGGCTTCAGCAGTTAGTTGTCAGAAAATGCCTTGGAATGAGGTAAATGACAAATTAGAAGATGGAGAAAGTTCTAGCAAGAAGCTGAAGACTGGTTTTGGCGGGATTTATGGATGTTACAGTTCTGGAGGTAGAGACTCTTTTAATAACAGTTTTACATCTCTTGGAAATGATCTTGGTTCCTGTTCTTCAGTCGAGGACAAAGGAGTAGAAGCTTGTGATGAGAAAATCATCTGTGAGGACTTGGGAAAAATGGAAAGAACCTTCTTTCCCGTTGATACAAAGAATATTAGTGACTCACAGCTAGTGCTAAATAGCATGTCAATGAAAGTACTTCACGGGTATGAGGACCAATTCCAAGATGGGATTCCGAATCTAGAGCTTGCTTTAGGGGGTGAAACAAAACCACCACCACCACCGTCACCTGCACCTAAGGGTATGCTGCCTTTCCTAGTTGGGGCAGTAGACGGGGGAAATAACCGTCAAGATAGCATAGCAGATGGGCAGGAGGATGATGGTGTTGCTGCATCTCTTTCCCTTTCCCTATCATTTCCATCTTCAAACCAGGAAAACACAAAAGCTACATCAAAATCAGAGCTTTTACCTGATGGGCACCGTGTTAATACCCCCTTTCTCCTTTTTGGGAGATTCACAGACAAATAA 4863 0.4092 MVLVQEILKHKLKDPNFCDSKSNPRSHFAVYCHHKVSPESGKKFVKHYMIQNTDMRLESGTCNVCSAPCSSCMHLNHALMGSKAEEFSDENCRLGEANNQFSTNEGNVCSLRSRSCESLQHAVSETSNMLSVNSSHDSLSENAESRQILSNKYQDSKHLEGHDDDTSCISGASDANLVNDSHQRNVERVNISFSSASVSHLGAEGSGSAPSVDMSGLEIPSSKDADTGHSSPKVQRLYGQSRSGKSLSSNPGLMHVERDSCSHIPEKFSECSIENSSSSLTKERAPNVVSGEKPVANNDILIDGTSKVSPIVCPKSEADTDNDVCDANAEDRKCSVHDGQHEKAEDLVKSPGKQEPQSEDESDESDVVEHDVKVCDICGDAGREDLLAICCRCSDGAEHTYCMREMLQKLPEGDWLCEECKDAEETENKKPDVEDKKIIKAGSTSQVSGKRLADNIDVAPPAAKRQAVELSTGSPKATSPKRLVPLSRESSFRSLDKLKAKPALLMPIRNHSGDDDTEIARSPSIGPRGQISKSMLLKSNSSKNLNSKPRVKLVDEVVLPKSKGGNEHASKNVEMPARMTSKSALFKSSSLGRSTATESKVKMLSPKSATAQELKGSRHLKESSAFDRKFLSRIDRPVASSVVSTPKGDQKLTPRGETTKPSAVNNNRELKVNQDGKLSVLSKSMSNVSRKSLEPQVSSERTSTNIDEALQDVLPRSRETANQVEKTRDGSCDHVRSAVPTASKGPFCQKCKEFGHSLEHCTAGTTQESGVEISVTASKSSKEGMHKGNRLKAAIQAALLKRPEIYKKKDVPNQTDEVSTSGTELNCEVTLQDQVLVSSTLKNSISAEETHEQKEILENSTFDSSKCSSASDLKQLNSCPTDFCSQPGKSDSIGVTAGKPLVRDLSNKALAISSVLSKMLAFPEYEYIWQGVFEVHRNGKPPDLCNGVQAHLSSCASPKVPEVVTKFLPKVPLNEVSRLSTWPLQFHHGGAREDNIALYFFARDVESYERYYKGLLDHMIKNDLALKGIFDGVELLIFPSNQLPENSQRWNMLFFLWGVFRGRRINHSDSAKKICIPCLNAVPVVENSSTAVVTLSETHCSPKCMDEESINCDKACNALLPSTSLDQCQITVSRNIDINQQTHLGPQVSLEKRDSRIDTKSTSSVPRSSTQLCQAMKSASSSLNASVLEHGQCRVSKPPEAMGTSVSSRIVETKTDSDISVKQENVLSSAIPSVDNQERGAASDTSKGEILDRMNSDEEQQTTKRKQKEDCRYIDLEETIDNQETGAASNISEDKISERMNSDENQQRPKRKQKHDHYIDLEETVENQETVAAGNIGKDEISEKMDGNDDQRQLKRKLKEDDCYIDLEATFQEDPSVEVIKCQLPNDKEVQHVDLSESVLQASAVSCQKMPWNEVNDKLEDGESSSKKLKTGFGGIYGCYSSGGRDSFNNSFTSLGNDLGSCSSVEDKGVEACDEKIICEDLGKMERTFFPVDTKNISDSQLVLNSMSMKVLHGYEDQFQDGIPNLELALGGETKPPPPPSPAPKGMLPFLVGAVDGGNNRQDSIADGQEDDGVAASLSLSLSFPSSNQENTKATSKSELLPDGHRVNTPFLLFGRFTDK* 1621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02354 1620 MobiDBLite consensus disorder prediction 1143 1169 - -
Rops1g02354 1620 MobiDBLite consensus disorder prediction 199 255 - -
Rops1g02354 1620 MobiDBLite consensus disorder prediction 584 620 - -
Rops1g02354 1620 MobiDBLite consensus disorder prediction 643 669 - -
Rops1g02354 1620 MobiDBLite consensus disorder prediction 335 358 - -
Rops1g02354 1620 MobiDBLite consensus disorder prediction 224 255 - -
Rops1g02354 1620 MobiDBLite consensus disorder prediction 1296 1316 - -
Rops1g02354 1620 MobiDBLite consensus disorder prediction 641 669 - -
Rops1g02354 1620 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 357 446 IPR013083 -
Rops1g02354 1620 MobiDBLite consensus disorder prediction 335 367 - -
Rops1g02354 1620 MobiDBLite consensus disorder prediction 1579 1598 - -
Rops1g02354 1620 MobiDBLite consensus disorder prediction 127 146 - -
Rops1g02354 1620 MobiDBLite consensus disorder prediction 684 703 - -
Rops1g02354 1620 SUPERFAMILY FYVE/PHD zinc finger 361 424 IPR011011 -
Rops1g02354 1620 MobiDBLite consensus disorder prediction 1230 1316 - -
Rops1g02354 1620 MobiDBLite consensus disorder prediction 1576 1607 - -
Rops1g02354 1620 PANTHER - 372 1087 - -
Rops1g02354 1620 MobiDBLite consensus disorder prediction 464 484 - -
Rops1g02354 1620 MobiDBLite consensus disorder prediction 508 531 - -
Rops1g02354 1620 MobiDBLite consensus disorder prediction 584 612 - -
Rops1g02354 1620 MobiDBLite consensus disorder prediction 1250 1279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02354 Rops-Chr1 45869771 45883170 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02354 - - gmx:100806639 2052.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00202 3 2638893 2648574 Rops1g02354 1 45869771 45883170 ECH
Rops1g02354 1 45869771 45883170 Rops1g02354 1 45869771 45883170 ECH