Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02351 ATGGGGGATGGAGGAGGTGCAGATGAAGGTGATGTTAGAAAGAATGAAGAAGAAAACAAATGGCCACCATGGCTGAGACCACTACTCCAAACAAGCTTCTTTGTTCAATGCAAAATCCATGCAGATTCCCACAAAAGTGAATGCAAGATGTATTGCTTGGATTGTATGAATGGAGCCCTTTGCTCTGCTTGTTTGGCTTCTCACAAAGAACACAGAGCTATTCAGATAAGGAGGTCTTCATACCATGATGTGATTAGGGTGTCTGAGATACAGAAATTTCTGGACATAACAGGAGTCCAGACTTACATTATAAACAGTGCCAAGATAGTGTTCTTGAATGAAAGGCCTCAACCTAGGCCTGGCAAAGGAGTCACCAATACCTGCCAGGTCTGTGAGCGCAGCCTTCTTGATTCCTTCAGCTTCTGCTCTCTTGGTTGTAAGATAGTTGGAACCTCCAAGAAGTTCCAGAAGAAGAAAATGTTAGCTGAGATGGATGGGTCTGATGGTGAAGAATCAATTAGTAATGGGAGTGCCAGAAACAAAATCCAGAGCTTTACACCATCAACACCACCACCAACAGTGGTAAGTTACAGGACTGCTAAGAGGAGAAAAGGAGTCCCTCGTAGAGCTCCAATGGGGGGAGGGCTTATAATAGAATACTAA 663 0.4389 MGDGGGADEGDVRKNEEENKWPPWLRPLLQTSFFVQCKIHADSHKSECKMYCLDCMNGALCSACLASHKEHRAIQIRRSSYHDVIRVSEIQKFLDITGVQTYIINSAKIVFLNERPQPRPGKGVTNTCQVCERSLLDSFSFCSLGCKIVGTSKKFQKKKMLAEMDGSDGEESISNGSARNKIQSFTPSTPPPTVVSYRTAKRRKGVPRRAPMGGGLIIEY* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02351 220 CDD Bbox2 37 76 - -
Rops1g02351 220 MobiDBLite consensus disorder prediction 170 195 - -
Rops1g02351 220 MobiDBLite consensus disorder prediction 165 195 - -
Rops1g02351 220 Pfam PLATZ transcription factor 77 148 IPR006734 -
Rops1g02351 220 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 15 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02351 Rops-Chr1 45851352 45853732 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Rops1g02351 PLATZ 3.4e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02351 - - gmx:100792668 395.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00217 3 2778752 2780940 Rops1g02351 1 45851352 45853732 ECH
Rops1g02351 1 45851352 45853732 Rops1g02351 1 45851352 45853732 ECH