Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02344 ATGGTAAGCCCGAAAGTGCCTAGTCACTCGAAAATATGCTACAGGCCTATACGACCTTCTGACCTTGACATTTTAGAGCATCTCCATGGCAGACTATTTCCCATCAGGTACGAATCTAATTTTTTTCATGATGTGGTAAATGAATGTGGCATTGTGTCGTGGGGAGCTGTTGATTGTAGCCGGCCAGATGGTCAAAGTGATGAACTCATTGGATTTGTAACAGCGCGGATTGTTCCTGCAAAAGAAAGTGAGGTAGAGGATATGCTTGGATATAACTCAACCATATCAGATCAAACTTTAGTGTACGTTCTAACACTGGGAGTGGTGGAAGCATATAGGGGTCTTGGAATAGCTTCTTCTCTGATTCAAGAGGTCATAAAATATGCTTTAAGTATTCCGACCTGCAGAGCTGTTTACTTGCATGTAATTTCTCACAATAATGCAGCAATCAATTTATACAAGAAAATGTCTTTCAAGTGTGTAAGAAGGTTGCAGGGATTTTATTTAATCAATGGCCGATATTATGATTCATTTTTATTCCTGTACTATGTAAATGGGGGACGATCTCCTTGCTCGCCACTAGAGCTTCTCACTGCAATGGTAAGCTACTTGAGGAGTGGCTTTAAGTCGGTGACTGCTAGGCTGTGTAAGAAGGAAGGAAGGAAGATCTCAAGGCGGGCAAAGTGTAAAGAAAACCATTCTCTCGTGTCAGCAACACACAGCAAAAGAAACGTGGCAGTCGAGTGTACTGGTCATGAGTGTGTTTAA 768 0.418 MVSPKVPSHSKICYRPIRPSDLDILEHLHGRLFPIRYESNFFHDVVNECGIVSWGAVDCSRPDGQSDELIGFVTARIVPAKESEVEDMLGYNSTISDQTLVYVLTLGVVEAYRGLGIASSLIQEVIKYALSIPTCRAVYLHVISHNNAAINLYKKMSFKCVRRLQGFYLINGRYYDSFLFLYYVNGGRSPCSPLELLTAMVSYLRSGFKSVTARLCKKEGRKISRRAKCKENHSLVSATHSKRNVAVECTGHECV* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02344 255 Gene3D - 4 187 - -
Rops1g02344 255 Pfam Acetyltransferase (GNAT) family 46 158 IPR000182 GO:0016747
Rops1g02344 255 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 8 185 IPR016181 -
Rops1g02344 255 CDD NAT_SF 67 141 - -
Rops1g02344 255 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 12 185 IPR000182 GO:0016747
Rops1g02344 255 FunFam Histone acetyltransferase MCC1 isoform A 6 187 - -
Rops1g02344 255 PANTHER N-ALPHA-ACETYLTRANSFERASE 60 8 244 IPR045141 GO:0004596
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02344 Rops-Chr1 45746245 45749367 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Rops1g02344 Acetyltransf_1 4.9e-15 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02344 K22767 - gmx:100812509 439.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g02344 1 45746245 45749367 Rops1g02344 1 45746245 45749367 ECH