Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02268 ATGATTGCCACTGCTATCTCAACCACCGTCACTGATGCCAATCTTCATTCTCCTTTCATCTCATTCACCTCCTCCCCCATCTTTCATTTCCCACTTTCTCTTCATTTTCCCAATTCTCACCCCAAACGGCGGATTTCTTCTATCAGATGCCAATCAATTAACACCGATAAGCGGAAATCAAGTAGAAATCTGCTGGATAACGCAAGCAACCTCCTTACCAACTTGTTGAGTGGTGGAAGTATAGGGTCTATGCCCATAGCTGAAGGTGCTGTCACTGATTTGTTTGAACGACCTCTCTTCTTCTCACTATATGACTGGTTCTTGGAGCATGGAGCGGTGTATAAACTTGCTTTTGGACCAAAAGCATTTGTTGTTGTATCAGATCCCATAGTTGCAAGACATATTCTGCGAGAAAATGCATTTTCTTATGACAAGGGAGTACTTGCTGATATCCTAGAACCAATAATGGGCAAAGGACTCATACCTGCTGACCTTGATACTTGGAAGCAAAGGAGAAGAGTCATTGCTCCTGGTTTCCATACCTCATACTTGGAAGCTATGGTCAAAATATTCACAGCTTGTTCAGAAAGAACAATATCAAAGGTCAATAAGCTTCTTGAAGGAGAGGGTTATGATGGACAGAAATCAATCGAGTTGGATCTTGAAGCTGAATTTTCAAGTTTGGCTCTTGATATTATTGGGCTTTGTGTGTTCAACTATGACTTTGGTTCAGTCACCAAAGAATCTCCTGTTATTAAGGCAGTCTATGGCACTCTTTTTGAAGCTGAACATAGATCCACTTTCTATATTCCATATTGGAAAATTCCCTTGGCAAGGTGGATAGTCCCAAGGCAAAGGAAGTTTCAGGAGGACCTTAAGATCATTAATACTTGTCTCGATGGACTTATCAAAAATGCAAAAGAGAGCAGGCAGGAAACAGATGTTGAGAAACTGCAGCAAAGGGATTACTTAAATTTGAAGGATGCTAGTCTTCTGCGTTTCCTGGTTGATATGCGGGGAGCTGATGTTGATGATCGTCAGTTGAGGGATGATTTAATGACAATGCTTATTGCTGGTCATGAGACAACTGCTGCAGTTCTTACTTGGGCAGTTTTCCTGCTAGCTCAAAATCCTAGCAAAATGAAGAAGGCTCAAGCAGAGATAGATTTGGTGCTGGGTATGGGAAGGCCAACTTTTGAATCACTTAAAAAATTGCAGTACATTAGGTTAATTGTTGTGGAGGTTCTTCGTTTATATCCCCAGCCACCTTTGCTGATTAGACGTTCACTCAAATCTGATGTTTTACCAGGAGGGCACAAAGGTGATAAAGATGGTTATGCAATTCCTGCTGGGACTGATGTCTTCATTTCTGTATATAATCTCCATAGATCTCCATATTTTTGGGACCGCCCTCATGAGTTTGAACCAGAGAGATTTCTAGTGCAAAGCAAGAATGAAGAAGTTGAAGGATGGGCTGGTTTTGACCCATCTCGAAGTCCCGGAGCCTTGTATCCAAACGAGGTTATATCGGATTTTGCATTCTTGCCCTTTGGTGGAGGACCACGAAAATGTGTTGGGGACCAATTTGCTCTCATGGAGTCGACTGTAGCACTGACTATGCTGCTCCAGAATTTTGACGTGGAATTGAAAGGCACTCCTGAATCGGTCGAACTAGTTACAGGGGCAACTATCCATACCAAAAATGGAATGTGGTGCAATTTAAGGAAGAGATCTGGTAAAGAGCCACCACAGTTTATTGCTCTTTTCCAACCTTTGTCTATTTCAGGGAGGTTTGAGCACATAACAGATAAAGATTTGCCAGATGAAACATACACAATAAAGAGTATTGCACTTATTCGAATTGATGCCGTAAGTGGACATCAAATTCATAGCAGCAAGTTGATACAGTGCAAGTAG 1917 0.4173 MIATAISTTVTDANLHSPFISFTSSPIFHFPLSLHFPNSHPKRRISSIRCQSINTDKRKSSRNLLDNASNLLTNLLSGGSIGSMPIAEGAVTDLFERPLFFSLYDWFLEHGAVYKLAFGPKAFVVVSDPIVARHILRENAFSYDKGVLADILEPIMGKGLIPADLDTWKQRRRVIAPGFHTSYLEAMVKIFTACSERTISKVNKLLEGEGYDGQKSIELDLEAEFSSLALDIIGLCVFNYDFGSVTKESPVIKAVYGTLFEAEHRSTFYIPYWKIPLARWIVPRQRKFQEDLKIINTCLDGLIKNAKESRQETDVEKLQQRDYLNLKDASLLRFLVDMRGADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKMKKAQAEIDLVLGMGRPTFESLKKLQYIRLIVVEVLRLYPQPPLLIRRSLKSDVLPGGHKGDKDGYAIPAGTDVFISVYNLHRSPYFWDRPHEFEPERFLVQSKNEEVEGWAGFDPSRSPGALYPNEVISDFAFLPFGGGPRKCVGDQFALMESTVALTMLLQNFDVELKGTPESVELVTGATIHTKNGMWCNLRKRSGKEPPQFIALFQPLSISGRFEHITDKDLPDETYTIKSIALIRIDAVSGHQIHSSKLIQCK* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02268 638 CDD CYP97 101 571 - -
Rops1g02268 638 PRINTS E-class P450 group I signature 107 126 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02268 638 PRINTS E-class P450 group I signature 367 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02268 638 PRINTS E-class P450 group I signature 514 524 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02268 638 PRINTS E-class P450 group I signature 524 547 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02268 638 PRINTS E-class P450 group I signature 347 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02268 638 SUPERFAMILY Cytochrome P450 97 577 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02268 638 Gene3D Cytochrome P450 83 585 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02268 638 Pfam Cytochrome P450 107 572 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02268 638 PANTHER CYTOCHROME P450 FAMILY 4 109 577 - -
Rops1g02268 638 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 517 526 IPR017972 GO:0005506|GO:0016705
Rops1g02268 638 PRINTS P450 superfamily signature 358 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02268 638 PRINTS P450 superfamily signature 515 524 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02268 638 PRINTS P450 superfamily signature 410 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02268 638 PRINTS P450 superfamily signature 524 535 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02268 Rops-Chr1 44769875 44777649 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g02268 30 578 Cytochrome P450 AT4G15110 78.545 0.0 910
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02268 K24543 - gmx:606504 1013.06