Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02252 ATGAATTCGATGGAGAAGACCACCGACACAAAATCTAAAGAAATTGAGAGACGCTACAATAATTACCGAAAGAAGAGAAAACGACCTTGTAAGTTGGCTGTGATTCCGACAACGAAAAACAGAGAAGTGGAGTGTATAGAGTCAGCCGCCACGGCATCACACGGTTTCATCTCCGTGATCGGGAGGCGGAGGGTGATGGAGGATGCTGTTAAGGTGGTTCCTTGTTTCGTGGCGGCGGAACATTGTTGCTACGATTTCTTCGCGGTTTATGACGGTCACGGTGGGACGATGGTGGCTTATGCTTGTCGTGACAGGTTGCACTTGTTGTTGGAGGAGGAAGTTAAGGAGTGGTTGAAGAGCAGGGATCAGGGATTGGATTGGTATAAAGTGATGTGTTCTTGTTTCATGAAGATGGATCATGAAATTGGAGTCGGTGGCGGTGATGCTGATGAGGAAAATGGAGGGAACACGATGGGTTCAACGGCGGCGGTGGTGTTGGTGGGGAAGGAGGAGATTGTGGTGGCGAATTGTGGGGACTCGAGAGCGGTGTTGTGTCGTGGCGGTGTTGCTGTGCCACTTTCACGTGATCATAAGCCTGATCTTCCTGATGAAAAAGAGAGGATCGAAGCGGCAGGTGGAAGAGTCATTAATTGGAATGGGAATCGTGTTTTAGGAGTACTTGCTACTTCCAGATCCATAGGGGATCACTGCATGAAGCCTTTTGTGATTTCTCAACCAGAGATCAACGTGTACGCACGAACAGAGTCAGATGAGTTTGTTGTAGTAGCGAGTGACGGTCTGTGGGATGTAGTATCCAACAAGTTTGTTTGTGAAGTGGCAAGAAGTTGCATCCTAGGGCAAATGAGGAGGAGTTTAAAAGAGGACTCAATCAAAAGTTATGCAGCAGAGGCAGCAGCATTGTTAGCCGAGTTGGCTATGGCTCGGGGTAGCAAAGACAACATCAGTGTTATAGTCATCCAGCTGAAGGGTACACCTTGA 999 0.4815 MNSMEKTTDTKSKEIERRYNNYRKKRKRPCKLAVIPTTKNREVECIESAATASHGFISVIGRRRVMEDAVKVVPCFVAAEHCCYDFFAVYDGHGGTMVAYACRDRLHLLLEEEVKEWLKSRDQGLDWYKVMCSCFMKMDHEIGVGGGDADEENGGNTMGSTAAVVLVGKEEIVVANCGDSRAVLCRGGVAVPLSRDHKPDLPDEKERIEAAGGRVINWNGNRVLGVLATSRSIGDHCMKPFVISQPEINVYARTESDEFVVVASDGLWDVVSNKFVCEVARSCILGQMRRSLKEDSIKSYAAEAAALLAELAMARGSKDNISVIVIQLKGTP* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02252 332 Gene3D - 41 331 IPR036457 -
Rops1g02252 332 Pfam Protein phosphatase 2C 55 321 IPR001932 -
Rops1g02252 332 CDD PP2Cc 53 328 IPR001932 -
Rops1g02252 332 ProSitePatterns PPM-type phosphatase domain signature. 86 94 IPR000222 GO:0043169
Rops1g02252 332 ProSiteProfiles PPM-type phosphatase domain profile. 53 328 IPR001932 -
Rops1g02252 332 FunFam Protein phosphatase 2C 51 46 332 - -
Rops1g02252 332 SMART PP2C_4 43 326 IPR001932 -
Rops1g02252 332 PANTHER PROTEIN PHOSPHATASE 31 328 IPR015655 GO:0004722|GO:0006470
Rops1g02252 332 SUPERFAMILY PP2C-like 49 330 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02252 Rops-Chr1 44509826 44512460 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g02252 50 329 PP2C-type Phosphatase Gene Family AT2G29380 48.123 1.73e-83 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02252 K14497 - gmx:100813248 470.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g02252 1 44509826 44512460 Rops1g02252 1 44509826 44512460 ECH