Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02251 ATGGAAGGAATGCGAGACAGTAACGCACAGCTTGAACTCCGAGATGGTGCTGATATTGGTTCCTCTTTATCAAAGCTCATATTATCAAGTGGGACAAACACCCTGGACTCAATTTTCTCTGATTGCCTCTCGACAAATGGCACTACCACTACCACTAACTCCATGTTGGATTACTTGGAGAGTCCCTTAGGCTCTTCAAGGTTTGAGCCTTTGGGTTCCTCCGTCTACCTCCGCCAAAGAGACATCCTGCAAAAGTTCTACCAGGAAAGCAGGGGGAATGGGTCTTTTGTATCCACTTCCTTTGCAAATCCATCTGCATACACCAGTTCTTTGACTTCTTTGCTGAACCCTTGCAAGAAAAAGCTATACAGGGGAGTGAGACAGAGACACTGGGGGAAATGGGTTGCAGAGATTAGACTCCCTCAGAACAGGATGAGAGTCTGGCTAGGCACTTACGACACTGCTGAAGCTGCTGCATATGCCTATGATCGCGCAGCTTATAAGCTCCGTGGAGAATATGCACGTTTGAATTTCCCAAATCTAAAGGACCCCAGTAAGCTAGGATTTGGAGATTCCACGAGATTGAATGCTTTGAAGAGCTCCGTGGATGCCAAAATTCAAGCTATATGTCAAAAGGTGAAAAGGGAAAAAGCCAAGAAGAGTGCAGCAAAGAAGCTGAAGTCAAGTAAGGACACAAACCGCGGGCAGAATGAGGATTCACAGAAGATCAACTCATCTTCTTGTTCTTCATCATCAATACCTTTGTCACCGCCGATTTTTAATGATAATTGGGCGAATGAATTATTTTCACCAGCTGTTTCAGAGGATGGAATTTGGAAAGGGGAGAACTCGCCGGTCTCTGTTTCAACAGAATATCCAACAATGATAACAGAGGAATCAGTGTTCGAAGGATGTTCCCTGGCAAGGCTGCCATCCTTCGATCCTGAGTTGATTTGGGAAGTTTTGGCTGTTTAG 975 0.4523 MEGMRDSNAQLELRDGADIGSSLSKLILSSGTNTLDSIFSDCLSTNGTTTTTNSMLDYLESPLGSSRFEPLGSSVYLRQRDILQKFYQESRGNGSFVSTSFANPSAYTSSLTSLLNPCKKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYDTAEAAAYAYDRAAYKLRGEYARLNFPNLKDPSKLGFGDSTRLNALKSSVDAKIQAICQKVKREKAKKSAAKKLKSSKDTNRGQNEDSQKINSSSCSSSSIPLSPPIFNDNWANELFSPAVSEDGIWKGENSPVSVSTEYPTMITEESVFEGCSLARLPSFDPELIWEVLAV* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02251 324 MobiDBLite consensus disorder prediction 220 251 - -
Rops1g02251 324 SMART rav1_2 122 185 IPR001471 GO:0003700|GO:0006355
Rops1g02251 324 FunFam Ethylene-responsive transcription factor 2 121 180 - -
Rops1g02251 324 SUPERFAMILY DNA-binding domain 122 179 IPR016177 GO:0003677
Rops1g02251 324 PRINTS Ethylene responsive element binding protein signature 145 161 IPR001471 GO:0003700|GO:0006355
Rops1g02251 324 PRINTS Ethylene responsive element binding protein signature 123 134 IPR001471 GO:0003700|GO:0006355
Rops1g02251 324 CDD AP2 121 181 IPR001471 GO:0003700|GO:0006355
Rops1g02251 324 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 23 322 - -
Rops1g02251 324 Gene3D AP2/ERF domain 122 180 IPR036955 GO:0003700|GO:0006355
Rops1g02251 324 Pfam AP2 domain 123 172 IPR001471 GO:0003700|GO:0006355
Rops1g02251 324 ProSiteProfiles AP2/ERF domain profile. 122 179 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02251 Rops-Chr1 44489229 44490831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g02251 17 323 AP2-EREBP Transcription Factor Family AT1G64380 47.977 6.20e-70 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Rops1g02251 AP2 6.8e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02251 - - gmx:100785364 422.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g02251 1 44489229 44490831 Rops1g02251 1 44489229 44490831 ECH