Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02239 ATGGAACAGCTCCGGCATATTGGAGAGGTTCTTGGGAGTTTGAAAGCCCTAATGGTTTTGCGTGATGAAATTCAAATCAATCAACGTCAATGTTGTTTGGTCCTTGACATCTTCAGTTTGGCATTTGAAACAATAGCAGATGAGATAAGGCAGAACCTGAAGCTGGAGGAGAGGAATACCAAATGGAAACCCCTTGAGTTTCCTTTGAGAGAGCTATGCAGGGTTTTCAAAGAGGGTGAACTCTACATAAAGCAATGTTTGGATTCCAAGGATTGGTGGGGTAAAGCAATAACCCTTTCTCAGAATAAGGACTGTGTTGAATTTCACATTCACAACTTGCTATGCTATTTCCCTGCTGTCATTGAGGCAATTGAGAATGCTGGGGAGGTGTCGGGGCTTGATCACGATGAGAAGTTGAAGAAGAAAGTGATGCAAGCTAGGAAGTATGACATGGAATGGAATGATCCAAAGCTTTTTCAGTGGAGATTTGGGAAGCAGTATTTGGTCCCTCGTGAGATTTGCAAGCAGTTGGAGAATGCTTGGAGGGAAGATAGATGGAGGCTCATTGAAGCACTCAAGGAGAAGAGGAGTTCTACCAAAGTCACATGTACAAAGAAGGAGCAGAACCTTGCAGACTTGCTCATCAAGAAACTGCTGAACGGATCAGAGAAGACCAACAAGGAACTTTGGCCAATTTCAGTGCTTATAGGAGCTAAGGATTACCAGGTGAGAAGAAGATTAGGACGGGGAAGGGAGTTTAAGGAAATCCAATGGCTGGGACAAAACTTTGCTTTGAGGCACTTTCATGGGGGGAGAGAAGCTCACGAGGCTGAGATTTCCACATTGCTATCGCTTTCTCACCCCAACATATTGCAATTCCTATGTGGGTTTTATGATGAAGAGAAGAAAGAATTTTCTCTTGTGATGGAGTTGATGAATAAGGACCTGTGGACTTATATGAAAGAGAACTGTGGTCCAAGGAGACAGATTTTGTTCTCTATTCCTGTTGTGGTGGATCTCATGCTTCAGATGGCAAGAGGCATTGAGTACCTCCACTCCAAGAAGATTTACCATGGAGACCTTAACCCTTGTAACATCCTACTAAGAGCCAGGAACTCTCAAGAAGGTTATTTTCAAGCAAAAGTTTCAGGCTTTGGCCTCTCTTCCGTGACCAGTGGAGACACTAACACTACTCGAAGCTCACCAACTCAGAATCCAATTAGTGAGGAGCTCAACCCTTCCATTTGGCATGCCCCTGAAGTTCTGACAGAACTAGAACAATCTGGAAAAGCATCTACCTTTTGTAGGTACTCAGAGAAAGCAGATGCCTATAGTTTTGGGATGATATGCTTTGAGCTTTTGACAGGGAAAGTGCCTTTTGAGGATAACCACCTTCAAGGAGATAGAACCAACCACAATATCAAAGCAGGAGAGAGGCCTCTTTTCCCATACCGTTCACCAAAATACCTTGTCAGTTTGATCAAAAAGTGCTGGCAAACTGACCCAGCTCAGCGTCCTACTTTCTCATCTATTTGTAGGATTTTGCGCTACACCAAAAAGTTCCTTTCAATGAACACTGAGTACCATGCCATCAATCCTGAACTCAATCAACTTGAACTACTGTCCCCACCTGTGGATTGTTGTGACATAGAAGCAATGTTCCTCAAGAGCTTTCCATTGGAGAGGGCATCTGGTCTGTCTGCTGTGTCACAAATACCACATGAAATGTTTGCTTATAAAGTTGCAGAGAAAGGGAAGATAAGTCAGAGTAATACTAAAGATAAGTGCTGTGAGCCCACAAAGGATGAGCGGCCCTCGGTTTGTAGGGACGAAAATGATGACCAAAACACAGTTTGTGGAGATGATAATGCATCCGTAATGGAAGATCCACTCCCACTAGTTACCGATCCAAGGTCAATTTGTGATGACACACAGTCTGTTTGTTCTGAAGCCCCCTTAAGGAAAAGTGTCAGAATAAAGAAACCAGCAGCACCAGTGAAGGCCAAGAAAGATCAAGGAACATCAAAATTGCGTTCAACAAGATCATTACCACCATCTTTAGCTGGTCGGGTTTTAAAGGTGAATAAGGTGAATCAATCATCATTGGCATCGAGCCCTCTGAGCACTGGTAGAAGAAGACCTTCCCTTGTCTCTGAATCGGATCCCAATTCCAACATCAACAAAGGGAATCAAACACCATTAGTGTCCTCGAGCTCATTTAGGAGAAAAAAAAGTGAGGGCCTTGTCTCAGATTCCAAGCCAAGTTTAACGCCGAAAACAAGGGATCAGTCACCATTAACTAAATCTGGCAACGTCACAAATTTTAACACTAGTTTAAGGACTAAAATGTCACAAGTGACGTTGAACCCTTCTTTGAGCCCAGCAAGAGTAAGACGTGTCGGTTCTGATTTGAAGATGCAAAAGGGGTTAATGTCAAAACATGCATTGAGCACTTCAAGAACATGCACAAGTAGAAGATGTGTTCATGCATCAGATTTGGATAGTGGTTTAAAGAAAACAAGAAGTATACTATCACCTTTGGCATTGAGTCCCTTAAGCCCACATGTGAGTAGAAGAAAAACATGCGGCCATGCATCTGACTCAGAGAGCAATTTCAAGACAAAAAGAGAAAGCCTGTCACCATTCGCATTGAGCCCTTTGAGCCCATATGCAAGAAGAACATGTGGTCATGTCTCGGATTAA 2703 0.4314 MEQLRHIGEVLGSLKALMVLRDEIQINQRQCCLVLDIFSLAFETIADEIRQNLKLEERNTKWKPLEFPLRELCRVFKEGELYIKQCLDSKDWWGKAITLSQNKDCVEFHIHNLLCYFPAVIEAIENAGEVSGLDHDEKLKKKVMQARKYDMEWNDPKLFQWRFGKQYLVPREICKQLENAWREDRWRLIEALKEKRSSTKVTCTKKEQNLADLLIKKLLNGSEKTNKELWPISVLIGAKDYQVRRRLGRGREFKEIQWLGQNFALRHFHGGREAHEAEISTLLSLSHPNILQFLCGFYDEEKKEFSLVMELMNKDLWTYMKENCGPRRQILFSIPVVVDLMLQMARGIEYLHSKKIYHGDLNPCNILLRARNSQEGYFQAKVSGFGLSSVTSGDTNTTRSSPTQNPISEELNPSIWHAPEVLTELEQSGKASTFCRYSEKADAYSFGMICFELLTGKVPFEDNHLQGDRTNHNIKAGERPLFPYRSPKYLVSLIKKCWQTDPAQRPTFSSICRILRYTKKFLSMNTEYHAINPELNQLELLSPPVDCCDIEAMFLKSFPLERASGLSAVSQIPHEMFAYKVAEKGKISQSNTKDKCCEPTKDERPSVCRDENDDQNTVCGDDNASVMEDPLPLVTDPRSICDDTQSVCSEAPLRKSVRIKKPAAPVKAKKDQGTSKLRSTRSLPPSLAGRVLKVNKVNQSSLASSPLSTGRRRPSLVSESDPNSNINKGNQTPLVSSSSFRRKKSEGLVSDSKPSLTPKTRDQSPLTKSGNVTNFNTSLRTKMSQVTLNPSLSPARVRRVGSDLKMQKGLMSKHALSTSRTCTSRRCVHASDLDSGLKKTRSILSPLALSPLSPHVSRRKTCGHASDSESNFKTKRESLSPFALSPLSPYARRTCGHVSD* 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02239 900 MobiDBLite consensus disorder prediction 860 874 - -
Rops1g02239 900 Gene3D Transferase(Phosphotransferase) domain 1 236 539 - -
Rops1g02239 900 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 238 516 - -
Rops1g02239 900 FunFam Kinase family protein 238 528 - -
Rops1g02239 900 MobiDBLite consensus disorder prediction 592 611 - -
Rops1g02239 900 Pfam Protein of unknown function (DUF1221) 21 237 IPR010632 -
Rops1g02239 900 MobiDBLite consensus disorder prediction 750 776 - -
Rops1g02239 900 ProSiteProfiles Protein kinase domain profile. 241 522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops1g02239 900 MobiDBLite consensus disorder prediction 660 776 - -
Rops1g02239 900 MobiDBLite consensus disorder prediction 693 743 - -
Rops1g02239 900 MobiDBLite consensus disorder prediction 390 410 - -
Rops1g02239 900 MobiDBLite consensus disorder prediction 854 878 - -
Rops1g02239 900 Pfam Protein tyrosine and serine/threonine kinase 273 514 IPR001245 GO:0004672|GO:0006468
Rops1g02239 900 SUPERFAMILY Protein kinase-like (PK-like) 238 516 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02239 Rops-Chr1 44327809 44332019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g02239 278 522 MAP Kinase Kinase Kinase AT1G14000 34.800 2.53e-25 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Rops1g02239 PK_Tyr_Ser-Thr 1.7e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02239 - - psat:127120797 1271.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g02239 1 44327809 44332019 Rops1g02239 1 44327809 44332019 ECH