Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops1g02239 | ATGGAACAGCTCCGGCATATTGGAGAGGTTCTTGGGAGTTTGAAAGCCCTAATGGTTTTGCGTGATGAAATTCAAATCAATCAACGTCAATGTTGTTTGGTCCTTGACATCTTCAGTTTGGCATTTGAAACAATAGCAGATGAGATAAGGCAGAACCTGAAGCTGGAGGAGAGGAATACCAAATGGAAACCCCTTGAGTTTCCTTTGAGAGAGCTATGCAGGGTTTTCAAAGAGGGTGAACTCTACATAAAGCAATGTTTGGATTCCAAGGATTGGTGGGGTAAAGCAATAACCCTTTCTCAGAATAAGGACTGTGTTGAATTTCACATTCACAACTTGCTATGCTATTTCCCTGCTGTCATTGAGGCAATTGAGAATGCTGGGGAGGTGTCGGGGCTTGATCACGATGAGAAGTTGAAGAAGAAAGTGATGCAAGCTAGGAAGTATGACATGGAATGGAATGATCCAAAGCTTTTTCAGTGGAGATTTGGGAAGCAGTATTTGGTCCCTCGTGAGATTTGCAAGCAGTTGGAGAATGCTTGGAGGGAAGATAGATGGAGGCTCATTGAAGCACTCAAGGAGAAGAGGAGTTCTACCAAAGTCACATGTACAAAGAAGGAGCAGAACCTTGCAGACTTGCTCATCAAGAAACTGCTGAACGGATCAGAGAAGACCAACAAGGAACTTTGGCCAATTTCAGTGCTTATAGGAGCTAAGGATTACCAGGTGAGAAGAAGATTAGGACGGGGAAGGGAGTTTAAGGAAATCCAATGGCTGGGACAAAACTTTGCTTTGAGGCACTTTCATGGGGGGAGAGAAGCTCACGAGGCTGAGATTTCCACATTGCTATCGCTTTCTCACCCCAACATATTGCAATTCCTATGTGGGTTTTATGATGAAGAGAAGAAAGAATTTTCTCTTGTGATGGAGTTGATGAATAAGGACCTGTGGACTTATATGAAAGAGAACTGTGGTCCAAGGAGACAGATTTTGTTCTCTATTCCTGTTGTGGTGGATCTCATGCTTCAGATGGCAAGAGGCATTGAGTACCTCCACTCCAAGAAGATTTACCATGGAGACCTTAACCCTTGTAACATCCTACTAAGAGCCAGGAACTCTCAAGAAGGTTATTTTCAAGCAAAAGTTTCAGGCTTTGGCCTCTCTTCCGTGACCAGTGGAGACACTAACACTACTCGAAGCTCACCAACTCAGAATCCAATTAGTGAGGAGCTCAACCCTTCCATTTGGCATGCCCCTGAAGTTCTGACAGAACTAGAACAATCTGGAAAAGCATCTACCTTTTGTAGGTACTCAGAGAAAGCAGATGCCTATAGTTTTGGGATGATATGCTTTGAGCTTTTGACAGGGAAAGTGCCTTTTGAGGATAACCACCTTCAAGGAGATAGAACCAACCACAATATCAAAGCAGGAGAGAGGCCTCTTTTCCCATACCGTTCACCAAAATACCTTGTCAGTTTGATCAAAAAGTGCTGGCAAACTGACCCAGCTCAGCGTCCTACTTTCTCATCTATTTGTAGGATTTTGCGCTACACCAAAAAGTTCCTTTCAATGAACACTGAGTACCATGCCATCAATCCTGAACTCAATCAACTTGAACTACTGTCCCCACCTGTGGATTGTTGTGACATAGAAGCAATGTTCCTCAAGAGCTTTCCATTGGAGAGGGCATCTGGTCTGTCTGCTGTGTCACAAATACCACATGAAATGTTTGCTTATAAAGTTGCAGAGAAAGGGAAGATAAGTCAGAGTAATACTAAAGATAAGTGCTGTGAGCCCACAAAGGATGAGCGGCCCTCGGTTTGTAGGGACGAAAATGATGACCAAAACACAGTTTGTGGAGATGATAATGCATCCGTAATGGAAGATCCACTCCCACTAGTTACCGATCCAAGGTCAATTTGTGATGACACACAGTCTGTTTGTTCTGAAGCCCCCTTAAGGAAAAGTGTCAGAATAAAGAAACCAGCAGCACCAGTGAAGGCCAAGAAAGATCAAGGAACATCAAAATTGCGTTCAACAAGATCATTACCACCATCTTTAGCTGGTCGGGTTTTAAAGGTGAATAAGGTGAATCAATCATCATTGGCATCGAGCCCTCTGAGCACTGGTAGAAGAAGACCTTCCCTTGTCTCTGAATCGGATCCCAATTCCAACATCAACAAAGGGAATCAAACACCATTAGTGTCCTCGAGCTCATTTAGGAGAAAAAAAAGTGAGGGCCTTGTCTCAGATTCCAAGCCAAGTTTAACGCCGAAAACAAGGGATCAGTCACCATTAACTAAATCTGGCAACGTCACAAATTTTAACACTAGTTTAAGGACTAAAATGTCACAAGTGACGTTGAACCCTTCTTTGAGCCCAGCAAGAGTAAGACGTGTCGGTTCTGATTTGAAGATGCAAAAGGGGTTAATGTCAAAACATGCATTGAGCACTTCAAGAACATGCACAAGTAGAAGATGTGTTCATGCATCAGATTTGGATAGTGGTTTAAAGAAAACAAGAAGTATACTATCACCTTTGGCATTGAGTCCCTTAAGCCCACATGTGAGTAGAAGAAAAACATGCGGCCATGCATCTGACTCAGAGAGCAATTTCAAGACAAAAAGAGAAAGCCTGTCACCATTCGCATTGAGCCCTTTGAGCCCATATGCAAGAAGAACATGTGGTCATGTCTCGGATTAA | 2703 | 0.4314 | MEQLRHIGEVLGSLKALMVLRDEIQINQRQCCLVLDIFSLAFETIADEIRQNLKLEERNTKWKPLEFPLRELCRVFKEGELYIKQCLDSKDWWGKAITLSQNKDCVEFHIHNLLCYFPAVIEAIENAGEVSGLDHDEKLKKKVMQARKYDMEWNDPKLFQWRFGKQYLVPREICKQLENAWREDRWRLIEALKEKRSSTKVTCTKKEQNLADLLIKKLLNGSEKTNKELWPISVLIGAKDYQVRRRLGRGREFKEIQWLGQNFALRHFHGGREAHEAEISTLLSLSHPNILQFLCGFYDEEKKEFSLVMELMNKDLWTYMKENCGPRRQILFSIPVVVDLMLQMARGIEYLHSKKIYHGDLNPCNILLRARNSQEGYFQAKVSGFGLSSVTSGDTNTTRSSPTQNPISEELNPSIWHAPEVLTELEQSGKASTFCRYSEKADAYSFGMICFELLTGKVPFEDNHLQGDRTNHNIKAGERPLFPYRSPKYLVSLIKKCWQTDPAQRPTFSSICRILRYTKKFLSMNTEYHAINPELNQLELLSPPVDCCDIEAMFLKSFPLERASGLSAVSQIPHEMFAYKVAEKGKISQSNTKDKCCEPTKDERPSVCRDENDDQNTVCGDDNASVMEDPLPLVTDPRSICDDTQSVCSEAPLRKSVRIKKPAAPVKAKKDQGTSKLRSTRSLPPSLAGRVLKVNKVNQSSLASSPLSTGRRRPSLVSESDPNSNINKGNQTPLVSSSSFRRKKSEGLVSDSKPSLTPKTRDQSPLTKSGNVTNFNTSLRTKMSQVTLNPSLSPARVRRVGSDLKMQKGLMSKHALSTSRTCTSRRCVHASDLDSGLKKTRSILSPLALSPLSPHVSRRKTCGHASDSESNFKTKRESLSPFALSPLSPYARRTCGHVSD* | 901 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops1g02239 | 900 | MobiDBLite | consensus disorder prediction | 860 | 874 | - | - | |
Rops1g02239 | 900 | Gene3D | Transferase(Phosphotransferase) domain 1 | 236 | 539 | - | - | |
Rops1g02239 | 900 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 238 | 516 | - | - | |
Rops1g02239 | 900 | FunFam | Kinase family protein | 238 | 528 | - | - | |
Rops1g02239 | 900 | MobiDBLite | consensus disorder prediction | 592 | 611 | - | - | |
Rops1g02239 | 900 | Pfam | Protein of unknown function (DUF1221) | 21 | 237 | IPR010632 | - | |
Rops1g02239 | 900 | MobiDBLite | consensus disorder prediction | 750 | 776 | - | - | |
Rops1g02239 | 900 | ProSiteProfiles | Protein kinase domain profile. | 241 | 522 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops1g02239 | 900 | MobiDBLite | consensus disorder prediction | 660 | 776 | - | - | |
Rops1g02239 | 900 | MobiDBLite | consensus disorder prediction | 693 | 743 | - | - | |
Rops1g02239 | 900 | MobiDBLite | consensus disorder prediction | 390 | 410 | - | - | |
Rops1g02239 | 900 | MobiDBLite | consensus disorder prediction | 854 | 878 | - | - | |
Rops1g02239 | 900 | Pfam | Protein tyrosine and serine/threonine kinase | 273 | 514 | IPR001245 | GO:0004672|GO:0006468 | |
Rops1g02239 | 900 | SUPERFAMILY | Protein kinase-like (PK-like) | 238 | 516 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops1g02239 | Rops-Chr1 | 44327809 | 44332019 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops1g02239 | 278 | 522 | MAP Kinase Kinase Kinase | AT1G14000 | 34.800 | 2.53e-25 | 108 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | TKL_Gdt | Rops1g02239 | PK_Tyr_Ser-Thr | 1.7e-36 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops1g02239 | - | - | psat:127120797 | 1271.53 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Rops1g02239 | 1 | 44327809 | 44332019 | Rops1g02239 | 1 | 44327809 | 44332019 | ECH |