Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02229 ATGATTACAGGAGAGATTGTAAGAGTTGATGTGGACTACTCATCTAGCAGCAGGTCAAACTCAGAAGATGAGGAGTTCCTTGCCGAATTTAAGCTGAAAATAGCCAATGATGACTCCATCATCTATGAAGAGAGAACAGTAAGAAACGCTGCAGAAACAGTTGCTACTATCCGGGAGTTCAATTACTGCAATCTGTTTCTTATGGGTCGAAGGCCACACAGTGAACTGGCCTGTTATTTGAGAAGAAGTGAGTGTCCAGAACTAGGACCTGTTGGTGGTTTGTTGGCATCACAAGATTGCCCCACAACAGCATCGGTTTTGGTGATGCAACAGTATCAAGATAGGGTGCCAGTAAATTTTATCTCAGAAATGGAGGAACATTCACCTGACAGAGACACAGAATCTGCTTAA 411 0.4307 MITGEIVRVDVDYSSSSRSNSEDEEFLAEFKLKIANDDSIIYEERTVRNAAETVATIREFNYCNLFLMGRRPHSELACYLRRSECPELGPVGGLLASQDCPTTASVLVMQQYQDRVPVNFISEMEEHSPDRDTESA* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02229 136 PANTHER CATION/H + ANTIPORTER 17 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02229 Rops-Chr1 44164917 44168764 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g02229 23 112 Antiporter Super Family AT5G41610 48.913 2.40e-20 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02229 K26731 - gmx:100810155 174.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g02229 1 44164917 44168764 Rops1g02229 1 44164917 44168764 ECH