Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02211 ATGGATGAACTTGCACGCTTGATGGACTGGGATTTGCGAGCTATCACGGGATGCACCAATGAAGCCCCAGCCACCACCATGATGGGCAGCAACCCACATCTTAGTTTCTCTCATTTATGTTCTGAACTAGATGACGTTTTTCATGAATTCTCAGAAACCACAAGGGTCGTGGATGAATTGGAAGAGCTTTACAAACCTTTCTACCCTGTTATGAGCAACCCTGATCCTTCCATCATCACAAGTTCCCAACCTATCCCCAAAGAAGTCAAAGTATTCAAACCATCAAACAAAGTAGCTGTACAAGATTTGCAAGATCCCGCAGCATCTAAGTGTAAAAGAAGGAGGAAGAAGCAGAAAAAGAAGAGGGTTGAGCATGTGACAGCAGCAGATGGTGTTTCTCATGACCCATGGGCATGGCGTAAATATGGGCAGAAACCAATCAAAGGATCACCCTATCCCCGTAGCTATTATAGGTGCAGCAGCTCCAAAGGATGCTTGGCTAGGAAAAAGGTGGAACGGAGCCATTTGGATCCAGCAGTTCTGATAGTTACCTACACAGCAGAACACAGCCATCCTCACCCAACTTGCAAAGCACGGAACACCGGGAAGAAAAGTTGCACCTCAATTGCACCGCCAAGAGCTTATGATCCAAAGACACCTGTGGTGGTGGAGCCCATTGCGCCTAGTATTGAACCTGAACAAAACAAGGGCCTGAAGAAAGTGGAAGATGTTGTAGAAGGTGATGGTTGGTTTTCAAGCATTGAGCTAGATGAACTAGATGGTTGCGGCTTCATGGATACTACTTTTTGCTGA 813 0.4613 MDELARLMDWDLRAITGCTNEAPATTMMGSNPHLSFSHLCSELDDVFHEFSETTRVVDELEELYKPFYPVMSNPDPSIITSSQPIPKEVKVFKPSNKVAVQDLQDPAASKCKRRRKKQKKKRVEHVTAADGVSHDPWAWRKYGQKPIKGSPYPRSYYRCSSSKGCLARKKVERSHLDPAVLIVTYTAEHSHPHPTCKARNTGKKSCTSIAPPRAYDPKTPVVVEPIAPSIEPEQNKGLKKVEDVVEGDGWFSSIELDELDGCGFMDTTFC* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02211 270 FunFam WRKY transcription factor 22 115 187 - -
Rops1g02211 270 ProSiteProfiles WRKY domain profile. 128 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops1g02211 270 Gene3D WRKY domain 115 187 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops1g02211 270 SMART WRKY_cls 133 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops1g02211 270 Pfam WRKY DNA -binding domain 135 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops1g02211 270 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 62 208 IPR044810 GO:0003700
Rops1g02211 270 SUPERFAMILY WRKY DNA-binding domain 131 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02211 Rops-Chr1 43810215 43811129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g02211 9 195 WRKY Transcription Factor Family AT4G01250 42.929 7.96e-40 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Rops1g02211 WRKY 2.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02211 K13426 - gmx:102667019 239.965