Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02181 ATGGAACGACAAATGTGCAGAGAACTCTGGGAAAAGATGAAGTTTTGTACTTCATTGTTGTTTCTCTGTCTGATTTCTACACTCTCTCTTGTGGCTTCTGACACTGTTCCCTCAAACGAAGTTTGGGCGCTTACAAGCTTCAAAGAAGCTATATATGAAGACCCATATCATGTTTTATCCAATTGGCTTACGCTGGAATCAGATCCTTGTAACTGGTTTGGTGTCTCATGCACTATGGCTCGAGATCATGTCATCAAGCTAAACATCTCAGGATCATCATTAAAGGGGTTTCTTGCATCAGAGTTAGGGCAAATTACTTATTTGCAAGAACTAATTTTGCACGGGAACAATCTCATTGGAACAATACCTAAAGAGTTGAGCATGTTGAATTCTCTCAAGGTGTTGGATTTGGGAATGAATCAGTTAACTGGATCAATTCCTCCAGAGATTGGAAATTTAACCCAAGTTGTGAACATAAACCTGCAGTCTAATGGATTGACTGGTAGGCTACCTCCAGAGCTTGGAAATTTGAGATACCTTCAAGAACTTCGGCTGGATAGGAATAAGCTTCAGGGACCTGTTCCTGCTGGTGGCAGTTCGAATTTTGCTTCAAATATGCACGGGATGTCAGTGTATGCATCAAAGGAGAATGTAACTGGCTTCTGTCGTTCGTCTCAGTTAAAAGTAGCAGACTTTTCATATAATTTTTTAGTTGGTAGCATACCCAAATGCTTGGATTATCTTCCGAGGTTGAGCTTTCAAGGGAACTGCCTCCAGAGCAAAGACTTAAAACAGCGACCTTCCATACAATGTGCTGGTGCTTCACCTGCCAAGAGTCAGCCAGTGATGAACCAATACCACCAACCTGCTGAATATGTGCCCAAGCATCACGGAGCATCAAAACCTGCTTGGCTTTTGGCTCTAGAAATAGTAACGGGAACTATGGTTGGTTCTCTCTTTCTGGTTGCTGTTCTCGCTGCTTTCCAGAGATGTAACAAAAAATCGTCTATCATTATCCCTTGGAAAAAATCTGCAAGCCAGAAAGATCACACGACAGTATATTTAGACCCCGACATGCTAAAGGATGTGAGAAGTTATAGCAGACAAGAGCTTGAAGTGGCCTGTGAAGACTTCAGCAACATAATTGGGTCCTCACCAGACAGTGTGGTCTACAAGGGAACCATGAAAGGTGGGCCTGAGATTGCTGTAATTTCCCTCTGCATCAAGGAGGAGCATTGGACAGGATATCTTGAACTCTATTTTCAGAGAGAGGTGGCAGAATTGGCAAGGTTGAATCATGAGAATACTGGAAAACTACTTGGCTATTGTAGAGAAAGCACTCCATTTACAAGGATGTTGGTTTTTGACTATGCTTCAAATGGGACACTTCATGAGCACCTACATTGTTATGAAGAAGGATGCCAGTTCTCTTGGACACGGCGTATGAATATTGCTATAGGAATTGCACGTGGACTCAAGTATTTGCACACAGAAGTTGAGCCTCCATTCACTATCTCAGAGTTGAATTCTAGTGCTGTATACCTTACAGAAGAATTTTCCCCCAAGTTGGTTGATTTTGAAAGTTGGAAGACAATTCTTGAAAGATCAGAAAAGAATTCTGGTTCTATCAGCAGCCAAGGTGCTGTTTGTGTTCTTCCAAACTCCCTTGAGGCACGCCATCTAGATATCAAAGGAAACATATATGCTTTTGGGGTACTTCTTCTAGAGATAATCAGTGGGAGACCTCCATTCTGTAAAGACAAAGGGTACTTGGTGGACTGGGCCAAGGACTATCTTGAAATGCCAGAAGTAATGTCACATTTGGTGGATCCTGAATTGAAACAATTTAAATATGATGAACTCAAAGTGATATGTGAGGTAATAACTCTTTGTGTCAATCCTGATACAACTGCACGTCCATCCATGCGAGAATTATGTAACATGTTGGAGAGCAGAATTGACACATCAGCAAGCCTGGAGCTCAAGTCATCATCTTTGGCTTGGGCTGAACTTGCACTTCTATCATAA 2028 0.4191 MERQMCRELWEKMKFCTSLLFLCLISTLSLVASDTVPSNEVWALTSFKEAIYEDPYHVLSNWLTLESDPCNWFGVSCTMARDHVIKLNISGSSLKGFLASELGQITYLQELILHGNNLIGTIPKELSMLNSLKVLDLGMNQLTGSIPPEIGNLTQVVNINLQSNGLTGRLPPELGNLRYLQELRLDRNKLQGPVPAGGSSNFASNMHGMSVYASKENVTGFCRSSQLKVADFSYNFLVGSIPKCLDYLPRLSFQGNCLQSKDLKQRPSIQCAGASPAKSQPVMNQYHQPAEYVPKHHGASKPAWLLALEIVTGTMVGSLFLVAVLAAFQRCNKKSSIIIPWKKSASQKDHTTVYLDPDMLKDVRSYSRQELEVACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVAELARLNHENTGKLLGYCRESTPFTRMLVFDYASNGTLHEHLHCYEEGCQFSWTRRMNIAIGIARGLKYLHTEVEPPFTISELNSSAVYLTEEFSPKLVDFESWKTILERSEKNSGSISSQGAVCVLPNSLEARHLDIKGNIYAFGVLLLEIISGRPPFCKDKGYLVDWAKDYLEMPEVMSHLVDPELKQFKYDELKVICEVITLCVNPDTTARPSMRELCNMLESRIDTSASLELKSSSLAWAELALLS* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02181 675 Gene3D Transferase(Phosphotransferase) domain 1 458 665 - -
Rops1g02181 675 SUPERFAMILY L domain-like 38 251 - -
Rops1g02181 675 SUPERFAMILY Protein kinase-like (PK-like) 355 650 IPR011009 -
Rops1g02181 675 Pfam Protein tyrosine and serine/threonine kinase 380 649 IPR001245 GO:0004672|GO:0006468
Rops1g02181 675 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 37 200 - -
Rops1g02181 675 Gene3D Ribonuclease Inhibitor 153 276 IPR032675 -
Rops1g02181 675 Pfam Leucine rich repeat N-terminal domain 39 77 IPR013210 -
Rops1g02181 675 Gene3D Ribonuclease Inhibitor 39 152 IPR032675 -
Rops1g02181 675 Gene3D Phosphorylase Kinase; domain 1 349 457 - -
Rops1g02181 675 FunFam Inactive receptor-like serine/threonine-protein kinase 350 457 - -
Rops1g02181 675 PANTHER PROTEIN MALE DISCOVERER 2 13 675 - -
Rops1g02181 675 ProSiteProfiles Protein kinase domain profile. 376 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02181 Rops-Chr1 43379886 43384835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g02181 13 655 Receptor kinase-like Gene Family AT2G35620 28.248 8.57e-55 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Rops1g02181 PK_Tyr_Ser-Thr 2.5e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02181 - - gmx:100794714 1162.52