Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops1g02160 | ATGGGGAAGGCATCAAAATGGTTTCGTGGGCTTCTCGGTCTGAGAAGACCAGAAGAGTCACCGTCTGCCACCGCTGCCTCAGCTCCTAAACCACCCAAAGAGAAACGCCGATGGAGCTTCGTTAAGTCTTACAGAGAAAACAACAACAACCACCACCACCATGCCACCGTGGAAGGTGCCGATCCCGACAAACACGCCATGGCAGTGGCAGCGGTTGCCACTGCCATGGCTGAGGCCGCCGTCGCTGCTGTTCACGCGGCAGCCGCCGTTGCCAGTGGCAGGAATGCTGCCGGAGGCATTAGTCGCGAAGAATGGGCAGCCGTTAAGATTCAAGCCGCGTTTCGGGGCTGTTTGGCAAGGAAAGCGTTGCGAGCGTTAAAAGGATTGGTGAAGTTACAGGCATTGGTGAGAGGTCACATTGAGAGGAAGCGCACAGCAGAGTGGCTGCAAAGAATGCAAGCACTCTTCCGTGCACAGGCCCTAGTTCGTGCTGGGCGAACCCAAAATCTACATTCCTCATATTGGAATGCAAAGTCATCCTCTGGCCACCTTCATGGTCCAGCATCACCAGACATATTTGAAAGCCCAACCAGATATCGGAGCAAAACATGTGATCGGTCATCGTCAGTCCTCAAGAGAAACAGCTCCAAATCCCATGTCCAGATCAATGGCAATCTAGAGAAATGTGGAAGTAGATCAGATTTTAGGGTAGACAAACGATCATGGATGAGAACTTGTAGCATGGATGATGAAAGAAGCGTCGGGATTCTTGAAATTGAACCTGGAAAACCACACATCAAATCAAGACGTAGAAACCTCTCTTACTCCTCGAGTCAACCTTTGGTTTCTGATCATTACAGTCAGAGTTTGACCACCACCACCACAAAGGACTCAACATCTCATCAATTAGGTCAAAGTCCATCTTCTTGTGAAGTTCAGTCTTACAGCCCTCTAAAAATCATTGAGGCTGAGGAGAACTCATTCTATGCTGCTGACACTAGTCCTCAAATTTCATCTGCCTCTTCTAAAGATGGTGGCTCCAAAACAAGTCCTTTCACTCCTACCAGGAGTGATGGCTCAAGAAGCTATCTTAGTGGTTGTTCTGACTATCCAAGTTACATGGCTTACACCGAGTCTTCTAAGGCAAAGGTAAGATCTCTTAGTGCTCCAAAACAGAGGCCCCAGTACGAGAGGTCTAGTTCATCTGACAGGTACTCGCTTCATCGATTTGATGAGCCAAAATTGGCCACACAAAGGGTATCTGCTTTGCAAGCAAGTTTCACTAGCAAAGCCTATCCTGGTTCTGGTCGTTTGGACAAGCTTGGTTTGCCTGTGGAGTATTGA | 1344 | 0.4874 | MGKASKWFRGLLGLRRPEESPSATAASAPKPPKEKRRWSFVKSYRENNNNHHHHATVEGADPDKHAMAVAAVATAMAEAAVAAVHAAAAVASGRNAAGGISREEWAAVKIQAAFRGCLARKALRALKGLVKLQALVRGHIERKRTAEWLQRMQALFRAQALVRAGRTQNLHSSYWNAKSSSGHLHGPASPDIFESPTRYRSKTCDRSSSVLKRNSSKSHVQINGNLEKCGSRSDFRVDKRSWMRTCSMDDERSVGILEIEPGKPHIKSRRRNLSYSSSQPLVSDHYSQSLTTTTTKDSTSHQLGQSPSSCEVQSYSPLKIIEAEENSFYAADTSPQISSASSKDGGSKTSPFTPTRSDGSRSYLSGCSDYPSYMAYTESSKAKVRSLSAPKQRPQYERSSSSDRYSLHRFDEPKLATQRVSALQASFTSKAYPGSGRLDKLGLPVEY* | 448 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops1g02160 | 447 | MobiDBLite | consensus disorder prediction | 381 | 401 | - | - | |
Rops1g02160 | 447 | MobiDBLite | consensus disorder prediction | 262 | 310 | - | - | |
Rops1g02160 | 447 | MobiDBLite | consensus disorder prediction | 271 | 310 | - | - | |
Rops1g02160 | 447 | PANTHER | IQ-DOMAIN 5-RELATED | 1 | 407 | - | - | |
Rops1g02160 | 447 | SMART | iq_5 | 102 | 124 | IPR000048 | GO:0005515 | |
Rops1g02160 | 447 | SMART | iq_5 | 125 | 146 | IPR000048 | GO:0005515 | |
Rops1g02160 | 447 | MobiDBLite | consensus disorder prediction | 177 | 198 | - | - | |
Rops1g02160 | 447 | Pfam | IQ calmodulin-binding motif | 130 | 144 | IPR000048 | GO:0005515 | |
Rops1g02160 | 447 | Pfam | IQ calmodulin-binding motif | 105 | 124 | IPR000048 | GO:0005515 | |
Rops1g02160 | 447 | MobiDBLite | consensus disorder prediction | 1 | 36 | - | - | |
Rops1g02160 | 447 | ProSiteProfiles | IQ motif profile. | 103 | 131 | IPR000048 | GO:0005515 | |
Rops1g02160 | 447 | MobiDBLite | consensus disorder prediction | 381 | 407 | - | - | |
Rops1g02160 | 447 | MobiDBLite | consensus disorder prediction | 334 | 363 | - | - | |
Rops1g02160 | 447 | Pfam | Protein of unknown function (DUF4005) | 334 | 412 | IPR025064 | - | |
Rops1g02160 | 447 | Gene3D | - | 101 | 156 | - | - | |
Rops1g02160 | 447 | ProSiteProfiles | IQ motif profile. | 127 | 154 | IPR000048 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops1g02160 | Rops-Chr1 | 43086287 | 43090139 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops1g02160 | 82 | 447 | IQD Protein Family | AT4G23060 | 40.625 | 2.62e-51 | 178 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops1g02160 | - | - | qlo:115970044 | 439.113 |