Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02158 ATGTGGGCTCTATGTCTTGGAGCATTGATAATTATAAGCATTACACATTGGGTTTATAGATGGAGAAATCCTAATTGCAATGGAAAACTCCCACCAGGTTATATGGGTTTGCCTCTTCAGGGTGAGACTCTCCAGTTCTCCTCCCCTGACACTTCTTCTGAAATTCCTCCCTTCATCAAGCAAAGAATGGAGAGGTATGGACCAATCTTCAGGACAAGCTTGGTAGGACGACCAGTTGTGGGGTCAACAGACCCGGATCTTAATTACTTCATCTTGCAAAAGGAGGGACAAATGTTCCAGAGCCGTATTCATGAAAGGACTATTTTCGTTCCCTCTGGACATTCCAGGAACAGCTTATCACAAATGTCTGCAGAACTTGGGAAAGAGGAAACAATCCTCACTGAAGAGATGGTTCTGGACCTCATGTTTGGGCTCCTCTTTGCAAGCTTTGAAACCCTTTCTCTGGCTCTGACTTATGCCATGAAATTACTCTCTCATCGTCCCTTGGTGCTCAAGCAATTACAAGTGTGTTAA 534 0.4419 MWALCLGALIIISITHWVYRWRNPNCNGKLPPGYMGLPLQGETLQFSSPDTSSEIPPFIKQRMERYGPIFRTSLVGRPVVGSTDPDLNYFILQKEGQMFQSRIHERTIFVPSGHSRNSLSQMSAELGKEETILTEEMVLDLMFGLLFASFETLSLALTYAMKLLSHRPLVLKQLQVC* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02158 177 Gene3D Cytochrome P450 14 111 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02158 177 Gene3D Cytochrome P450 112 176 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02158 177 PANTHER CYTOCHROME P450 26 29 105 - -
Rops1g02158 177 Pfam Cytochrome P450 31 107 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02158 177 SUPERFAMILY Cytochrome P450 27 175 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02158 Rops-Chr1 43043901 43050349 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g02158 94 174 Cytochrome P450 AT1G12740 50.617 5.66e-14 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02158 - - lja:Lj2g3v2017310.1 182.57