Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02157 ATGGGTTTTCCCCTTCTGGGTGAGACCCTTCAATTCATCTCCCCTTACGCTTCTTCTGATATTCAACCCTTTGTTAAGAAGAGAATGGAAAGGTATGGACCAATCTTCAAGACCAGCTTGCTCGGACGATCAGTTGTAGTGTCAACAGACTCAGATCTCAATTACTTCATCTTCCAGAAGGAGGGACAAATGTTCCAGAGCTGGTACCCAGCTTCATTCACAAAGATTTTTGGGAAACAAGTACATAGGGTATATATAGCAGCCAGAGCAAGTACAGGAAGAGCGATGCTAAGGCTAACAAACTCACGCAAAAATGAAAAAAGAGTTGCTTCTAGAATTACCGGAATCGATTCTGAACTTCCCGCTGTTCCATGTCAGGGTGGGAAAAGGACAAGGAAGACGCTGAAGAAATTGCTGCATGAAAGACGAGAAATGCCTAGAAAACAGAAGACGGATTTCTTTGACTTTGTTATTGAAGACCTTGGTAAAGAGGGGACAATCCTCACTGAAGAGATCGCTCTGGACATCATGTTTGGGCTCCTCTTTGCAAGCTTTGAAACCACTTCTCTCGTTCTGACTTATGCCATGAAATTACTCACTGACTATCCCTTAGTGTTCAAGCAATTACAAGAAGAACATGAAGCCATTCTCAAACGACGTGAAGATCCCAACTCAGGAGTCACATGGCAAGAATACAAATCAATGAGATTTACATTCCAGTTCATAAATGAAACTCTGAGACTCGCAAATATAACTCCTGGGATCTTCAGGAAGACACTAAAGGATTTTAATTTTAAAGGATATACCATCCCAGCAGGCTGGACAATCATGGTGTGTCCCCCTGCTGTGCACTTGAACCCGGAGAATTTTCAGGACCCTCTTACATTCAACCCATGGAGATGGGAGGAAATGGAACTTGGTCCTAGTAAAAATTTCATGGCTTTCGGTGGAGGACTGAGATTTTGTATTGGAGCAGACTTTGCTAAGGTTGAGATGGCTGTTTTTCTTCATAGGTTGGTAACAGAGTACAGGTGGCGACTTGTCAAAGGAGGTGATACTGTTCGGACTCCTGTTTTACAATTTCCCAATGACTTTCACGTTAAGATGATGAAAAAAGAACAAAGTAAGCAAGAACCATAA 1140 0.4237 MGFPLLGETLQFISPYASSDIQPFVKKRMERYGPIFKTSLLGRSVVVSTDSDLNYFIFQKEGQMFQSWYPASFTKIFGKQVHRVYIAARASTGRAMLRLTNSRKNEKRVASRITGIDSELPAVPCQGGKRTRKTLKKLLHERREMPRKQKTDFFDFVIEDLGKEGTILTEEIALDIMFGLLFASFETTSLVLTYAMKLLTDYPLVFKQLQEEHEAILKRREDPNSGVTWQEYKSMRFTFQFINETLRLANITPGIFRKTLKDFNFKGYTIPAGWTIMVCPPAVHLNPENFQDPLTFNPWRWEEMELGPSKNFMAFGGGLRFCIGADFAKVEMAVFLHRLVTEYRWRLVKGGDTVRTPVLQFPNDFHVKMMKKEQSKQEP* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02157 379 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 315 324 IPR017972 GO:0005506|GO:0016705
Rops1g02157 379 PANTHER CYTOCHROME P450 26 1 106 - -
Rops1g02157 379 Gene3D Cytochrome P450 1 372 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02157 379 PRINTS P450 superfamily signature 240 251 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02157 379 PRINTS P450 superfamily signature 313 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02157 379 PRINTS P450 superfamily signature 322 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02157 379 PRINTS P450 superfamily signature 183 200 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02157 379 PRINTS E-class P450 group I signature 29 48 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02157 379 PRINTS E-class P450 group I signature 312 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02157 379 PRINTS E-class P450 group I signature 322 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02157 379 PRINTS E-class P450 group I signature 279 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02157 379 SUPERFAMILY Cytochrome P450 2 371 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02157 379 Pfam Cytochrome P450 131 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02157 Rops-Chr1 42994082 43001980 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g02157 1 80 Cytochrome P450 AT1G12740 65.000 9.64e-32 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02157 - - sind:105164141 468.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g02157 1 42994082 43001980 Rops1g02157 1 42994082 43001980 ECH