Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02154 ATGTGGGCTCTGTGCCTTGCAGCATTGATTATTATAGGCATTACACACTGGGCTTTTAGATGGAGAAATCCCAGGTGCAATGGAAAACTCCCTCCAGGTTCAATGGGTTTGCCCCTTCTGGGTGAGACCCTTCAGTTCTTCTCCCCCAACACTTCTTCTGATATTCCTCCATTCATCAAGCACAGAATGAAAAGGTATGGACCAATCTTCAAGACCAACTTGGTGGGACGACCAGTTATAGTGTCCACAGACCCGGATCTTAATCACTTCATCTTTCAACAGGAGGGACAAAATTTCCAGAGCTGGTACCCAGATACATTCACAGAGATCTTTGGGAGACGTAACGTAGGTTCCTTACATGGGTTTATGTACAAGTACCTTAAGAACATGGTGCTGAATCTGTTTGGTCCTGAAAGCCTTAAAAAGATGCTCTCTGAGGTTGAACAGACAACGTGCAGAACATTACAGCAGTGGTCGTATCAGGACGGTGTTGAGTTAAAGGATGCAACAGCAAGGATGATATTTGATTTGACTGCAAAAAAACTTATCAGTCATGATTCCACCAAGTCCTCCGAGAATTTAAGGGAAAATTTTGTTGCATTTATACAAGGACTCATCTCGTTCCCTCTTGACGTTCCAGGAACAGCTTATCACAAATGTCTACAGGGAAGGAAAAGGGCGATGAAGATGCTGAAGAACATGCTGCAGGAAAGACGGGAAATGCCTAGGAAACAGAAGACAGATTTCTTTGACTATGTTATTGAAGAACTTATGAAAGAGGGAACAATACTCACTGAAGCGATCGCTCTGGACCTCATGTTTGTGCTCCTCTTTGCAAGCTTTGAAACCACTTCGCTGGCTCTGACTTATGCCATGAAATTACTCTCTGACCATCCCTTGGTGCTCAAGCAATTACAAGAAGAACATGAAGCCATCCTCAAACGACGTGAAGATCCTAGCTCCAGAGTCACGTGGCAAGAATACAAATCAATGACATTTACATTTCAGTTCATTACTGAAACCGTAAGACTCGCAAATATAGTTCCAGGAATCTTCCGGAAGGCACTAAGAGATATTAATTTTAAGGGATATACCATACCAGCTGGCTGGGCGATCATGGTGTGTCCCCCAGCTGTACACTTGAACCCGGCGAAATATCAGGATCCTCTTGCCTTCAACCCATGGAGATGGGAGGGAGTGGAACTGAATGGTGCCAGCAAACATTTCATGGCTTTCGGTGGAGGCATGAGATTTTGTGTTGGGACAGAGTTCACCAAGGTTCAGATGGCTGTTTTTCTTCATAGCTTGGTAACAAAGTACAGGTGGCAACCCATCAAAGGAGGGAATATTGTTCGAACTCCTGGTTTACAATTTCCAAATGGCTTTCACGTTCAGATCATGGAGAAAGATCAAAGGAAGCAGGAACCAGAATATACCATTACAAATTAG 1449 0.4382 MWALCLAALIIIGITHWAFRWRNPRCNGKLPPGSMGLPLLGETLQFFSPNTSSDIPPFIKHRMKRYGPIFKTNLVGRPVIVSTDPDLNHFIFQQEGQNFQSWYPDTFTEIFGRRNVGSLHGFMYKYLKNMVLNLFGPESLKKMLSEVEQTTCRTLQQWSYQDGVELKDATARMIFDLTAKKLISHDSTKSSENLRENFVAFIQGLISFPLDVPGTAYHKCLQGRKRAMKMLKNMLQERREMPRKQKTDFFDYVIEELMKEGTILTEAIALDLMFVLLFASFETTSLALTYAMKLLSDHPLVLKQLQEEHEAILKRREDPSSRVTWQEYKSMTFTFQFITETVRLANIVPGIFRKALRDINFKGYTIPAGWAIMVCPPAVHLNPAKYQDPLAFNPWRWEGVELNGASKHFMAFGGGMRFCVGTEFTKVQMAVFLHSLVTKYRWQPIKGGNIVRTPGLQFPNGFHVQIMEKDQRKQEPEYTITN* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02154 482 PRINTS P450 superfamily signature 279 296 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02154 482 PRINTS P450 superfamily signature 419 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02154 482 PRINTS P450 superfamily signature 336 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02154 482 PRINTS P450 superfamily signature 410 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02154 482 SUPERFAMILY Cytochrome P450 27 465 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02154 482 CDD CYP90-like 62 466 - -
Rops1g02154 482 PRINTS E-class P450 group I signature 268 285 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02154 482 PRINTS E-class P450 group I signature 335 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02154 482 PRINTS E-class P450 group I signature 288 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02154 482 PRINTS E-class P450 group I signature 375 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02154 482 PRINTS E-class P450 group I signature 409 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02154 482 PRINTS E-class P450 group I signature 419 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02154 482 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02154 482 PANTHER CYTOCHROME P450 26 29 443 - -
Rops1g02154 482 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 412 421 IPR017972 GO:0005506|GO:0016705
Rops1g02154 482 Pfam Cytochrome P450 31 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02154 482 Gene3D Cytochrome P450 23 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g02154 482 FunFam Cytochrome P450 family protein 22 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02154 Rops-Chr1 42958817 42961612 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g02154 1 469 Cytochrome P450 AT1G12740 76.471 0.0 770
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02154 - - gmx:100812089 887.486