Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02147 ATGGCTGCACGGGCACATGATGTTGCTGCACTTGCACTTCGGGGAAAGTCAGCATGTCTCAATTTTGCAGATTCTTCATGGAGGTTGACGTTGCCGGCATCCACCAATGCGGAGGAGATAAGAAGAGCGGCGGTGGAGGCTGCTGAATTGTTTGCGGCGGAGGATAACCACCACCAGCGGCAGCAGAGTGTTGAACATTGCAGCGTTGGGGTCATAGTATATGCTGATAAGTCTCTACAACAGGAAGGGATGTATGTGGATCAAGTTGCAGCTGTGTCAGAATTTGAAGACTTGCATGATTTGCTTTTGAGTATTGCAGATGAGCCTTTACTGTCTCCTCCTCCTACAGCAAGAGATGGAAGGGACTGGAATGACGTGGAGATATTTGATGCCGAGGTGCCAGTATGGAACTTCTCAATTTGA 423 0.4894 MAARAHDVAALALRGKSACLNFADSSWRLTLPASTNAEEIRRAAVEAAELFAAEDNHHQRQQSVEHCSVGVIVYADKSLQQEGMYVDQVAAVSEFEDLHDLLLSIADEPLLSPPPTARDGRDWNDVEIFDAEVPVWNFSI* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02147 140 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 1 137 IPR045277 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02147 Rops-Chr1 42855446 42856250 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g02147 1 114 AP2-EREBP Transcription Factor Family AT1G63030 44.068 2.36e-24 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02147 - - gmx:100789097 148.673