Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02124 ATGACCAAAACCAAGCTAGTAATGTCCACCAAGGTGGAACTTGCATTGCTTCTTGGTCTCATTTTCGTGCTAACTGTCCCTCTAAGTTCAGCACACCAAAAACTAAAATTGAGACCAGCAAATGTTCAACATTATCTGCAAACAGAGAAACTTGAAGATCAAAGTAGCTTATTGACTTACATTGTTCATGTCAGAAAGCCTCAGGATGGTGCTTCTCTTCAATCTGAGGATTTGCATGGCTGGTACCATTCACTCCTGCCATTTAGTGCAAAAACTCAGAACCAACAGCGCATTATTTTCTCATACAGAAACGTGGTGGATGGATTTGCTGTGAAATTGACCCCAGAAGAAGCCAAAGCATTGGAAGAGAAGGAGGAGGTTGAGTCAGCACGGCCTGAAAAGATCCTATCTTTGCATACAACTCACACTCCAAGCTTCTTGGGGTTGCAACAAAGCCAAGGACTGTGGAAAGGTTCCAATTTTGGCAAAGGGATTATTATTGGAATCTTGGACACAGGGATATACCCTTACCATCCCTCCTTTTCTGATGAAGGAATGCCTTCTCCACCTGCAAAATGGAGTGGCCTCTGTGAATTCACAGGTGGGAGGACTTGTAATAACAAGCTCATTGGTGCAAGGAATATCCTTAAGAACACAAATTCTTCCCTTCCATTTGATGATGTTGGTCATGGAACTCACACAGCTAGCACAGCCGCTGGAAGACCTGTGAAGGATGCTAGTGTTTTTGAAAATGCTAAAGGTACAGCAGTTGGCATGGCACCTGATGCACACTTAGCAATTTACAAGGTATGTGGCATTACGGGTTGTCCTGAAAGTGCAATATTAGCTGGAATGGACACTGCTGTTGAAGATGGTGTTGATGTACTTTCTCTGTCCCTTGGAGGACCCTCTGATCCTTTCTTTGAAGATGGAATTGCATTGGGTGCATTTGGTGCAATTCAGAAGGGAATTTTTGTGAGTTGTTCGGCTGCTAATGCAGGTCCTGGTTATGATACATTGTCTAATGAGGCTCCATGGATTCTCACCGTTGGTGCCAGCACCATTGATAGAAAAATACTGGCAGCAGCGAAGCTTGGCGACGGGGAAGAATATTTTGGGGAATCAGTGTTCCAACCCAAAAACTTTACATCCACATTATTGCCCCTTGTCTATGCAGGTGCAAATGGAAACCAGTTCTCTACCTTTTGTGCCCCAGGATCCTTAAGGAACCTTGATGTTAAGGGAAAGGCAGTATTGTGTGAGCAAGGTGGATTTGTTGCAAGAGTAGCCAAAGGGGAAGAAGTTAAGGATGCTGGTGGTTCTGCCATGATCCTCATGAACAGTGAACGTGAAGCCTTCAATCCCATTGCTGATGCTCATGTTCTTCCTGCTGTGCATGTAAGTTACAATGCTGGGTTGGCAATCAAAGATTATATAAATTCAACTTCAACACCAACAGCCACAATCTTATTCAAAGGAACTGTTTTAGGAAATCCAGTTGCCCCTCAAGTTGCTTCCTTTTCTTCTAGAGGTCCAAGTGGTGCAAGCCCAGGAATTCTAAAACCAGACATAATAGGACCTGGAGTGAACATTCTAGCTGCATGGCCTGTGTCATTGGACAACCATGTACCACCATTTAACATAATTTCAGGTACCTCAATGTCTTGTCCTCATCTCAGTGGCATTGCAGCTCTACTGAAAAACTCTCATCCAGATTGGTCCCCAGCTGCCATAAAATCAGCAATCATGACCACTGCTTATGGAGTGAATCTTGAAGGCACTCCAATATTGGATCAAAGGCGTCTACCAGCTGATGTATTTGCCATAGGTGCTGGACATGTCAACCCTTTGAAAGCAAATGATCCAGGGCTTATTTATGATATAGAACCAAATGATTACATTCCTTATTTATGTGGTTTGAATTACACGGACAGACAAGTTGGAGTTATTTTACAACAGAAGGTGAAATGCTCTGAGGTGAAGAGCATAGAGGAAGCACAACTCAATTATCCATCATTTTCTATTCGATTGGGGTCCACTTCACAGTTCTACACCAGAACGGTGACAAATGTTGGACCCCCCAACTCAACTTACACTGTGGAACTTGATGTGCCTTTGGCAGTGGGAATGAGTGTGAGCCCTGCTCAACTAACATTCACAGAGGTGAAGCAGAAAGTTACATACGCTGTTGAGTTTATACCAGAAGACAAAGAGAAAAGAGGCAATCACCCGTTTGCTCAGGGGTCTATCAAGTGGGTATCTGGGAAGTACTCTGTTCGCATCCCTATATCTATCATCTTTCTGTGA 2307 0.4361 MTKTKLVMSTKVELALLLGLIFVLTVPLSSAHQKLKLRPANVQHYLQTEKLEDQSSLLTYIVHVRKPQDGASLQSEDLHGWYHSLLPFSAKTQNQQRIIFSYRNVVDGFAVKLTPEEAKALEEKEEVESARPEKILSLHTTHTPSFLGLQQSQGLWKGSNFGKGIIIGILDTGIYPYHPSFSDEGMPSPPAKWSGLCEFTGGRTCNNKLIGARNILKNTNSSLPFDDVGHGTHTASTAAGRPVKDASVFENAKGTAVGMAPDAHLAIYKVCGITGCPESAILAGMDTAVEDGVDVLSLSLGGPSDPFFEDGIALGAFGAIQKGIFVSCSAANAGPGYDTLSNEAPWILTVGASTIDRKILAAAKLGDGEEYFGESVFQPKNFTSTLLPLVYAGANGNQFSTFCAPGSLRNLDVKGKAVLCEQGGFVARVAKGEEVKDAGGSAMILMNSEREAFNPIADAHVLPAVHVSYNAGLAIKDYINSTSTPTATILFKGTVLGNPVAPQVASFSSRGPSGASPGILKPDIIGPGVNILAAWPVSLDNHVPPFNIISGTSMSCPHLSGIAALLKNSHPDWSPAAIKSAIMTTAYGVNLEGTPILDQRRLPADVFAIGAGHVNPLKANDPGLIYDIEPNDYIPYLCGLNYTDRQVGVILQQKVKCSEVKSIEEAQLNYPSFSIRLGSTSQFYTRTVTNVGPPNSTYTVELDVPLAVGMSVSPAQLTFTEVKQKVTYAVEFIPEDKEKRGNHPFAQGSIKWVSGKYSVRIPISIIFL* 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02124 768 Gene3D - 637 766 - -
Rops1g02124 768 Pfam Subtilase family 162 589 IPR000209 GO:0006508|GO:0008236
Rops1g02124 768 CDD PA_subtilisin_like 364 489 - -
Rops1g02124 768 ProSiteProfiles Serine proteases, subtilase domain profile. 146 620 - -
Rops1g02124 768 Pfam PA domain 388 475 IPR003137 -
Rops1g02124 768 CDD Peptidases_S8_3 138 587 IPR034197 -
Rops1g02124 768 Pfam Peptidase inhibitor I9 59 139 IPR010259 -
Rops1g02124 768 Gene3D - 356 496 - -
Rops1g02124 768 PRINTS Subtilisin serine protease family (S8) signature 162 181 IPR015500 -
Rops1g02124 768 PRINTS Subtilisin serine protease family (S8) signature 226 239 IPR015500 -
Rops1g02124 768 PRINTS Subtilisin serine protease family (S8) signature 550 566 IPR015500 -
Rops1g02124 768 SUPERFAMILY Subtilisin-like 138 624 IPR036852 GO:0004252|GO:0006508
Rops1g02124 768 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 167 178 IPR023827 -
Rops1g02124 768 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 44 139 IPR037045 -
Rops1g02124 768 Pfam Fibronectin type-III domain 667 765 IPR041469 -
Rops1g02124 768 FunFam subtilisin-like protease SBT1.5 356 496 - -
Rops1g02124 768 Gene3D Peptidase S8/S53 domain 164 633 IPR036852 GO:0004252|GO:0006508
Rops1g02124 768 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 60 764 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02124 Rops-Chr1 42488750 42491056 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g02124 59 765 Subtilisin-like Serine Gene Family AT5G67360 46.395 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02124 - - gmx:100799902 1155.2