Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02123 ATGGAGAAAAGCAAGTACGGGATGAACCTTGTTTCGCTTCTTGGTCTCATTTTAATGCTTAGCTTCAACCCTACTTCAATGGCTGTAGAGGAAAGCCAAGACCTTGACAACTTGTTAACTTATATTGTTCATGTCAAAAAGCTAGAGGATGGAGCTTCTCTTCAATCAGAAGAGTTGCATAACTGGTACCACTCACTCCTGCCTGAAACCTCCAACAAGGAACGAATGGTTTTCTCTTACCGCAATGTAGCATCTGGATTTGCTGTGAAGTTGACCCCAGAAGAAGCTAAAGCTTTGGAAGAGAAAGTGGAGATTGTGTCAGCACGACCTGAAAGGACCCTTTCATTGCACACAACTCATACTCCAAGCTTCTTGGGGTTGAGGCAGGGACAAGGATTGTGGAATGATTCCAATCTTGGCAAAGGGGTCATAATTGGAGTCATAGACACAGGCATATTCCCTTTCCATCCATCCTTTAACGATGAAGGAATGCCACCACCACCAGCGAAATGGAAAGGCCACTGTGAATTCACTGGGGGGAGAACATGCAACAACAAGCTCATTGGTGCAAGAAATCTACTCAAAAATGCCACTGAAGAGCCTCCTTTTGAAAATTTCTTCCACGGAACCCACACTGCAGCAGAAGCCGCTGGAAGATTTGTAAAGGATGCTAGTGTTTTTGGCCAAGCTAAGGGTACAGCAGCTGGCATGGCACCCAATGCTCACATAGCAATGTACAAAGTGTGCAACGATAAAGTGGGATGCCCTGAAAGTGCCATGTTAGCTGCAATGGACATAGCCATTGATGATGGTGTGGATGTTCTTTCTCTTTCCCTTGGTTTAGGCTCTCTTCCATTCTATGATGACCCAATTGCAATTGGTGCATTTGCTGCCATTCAGAGTGGAATTTTTGTCAGTTGCTCTGCTGCCAACTCTGGCCCTGGCTACAGCACTCTCTCAAACGAGGCCCCATGGATTCTCACCGTTGGCGCAAGCACCATTGACAGAAAAATAGCAGCATCAGCAAAGCTTGGAAACGGAGCAGAATATGAAGGGGAATCACTATTCCAACCAAAGGATTTCTCTCCACAATTATTGCCACTTGTGTATGCTGGTCAAAATGGAAACCAATCCTCTGCCTTATGTGCCCCAAGATCCTTAAAAAACATTGATGTTAAAGGAAAGGTGGTGGTGTGCGATATAGGTGGAGGCATTTCAGGTGTTGTCAAAGGGCAAGAAGTTTTAGATGCAGGTGGTGTGGCTATGATCCTCACGAATGCACAAGTCGTTGGCTTCAGTACCTTCGCTATTGCTCATGTTCTACCCGCTGTGCATGTGAGTTATGCTGCTGGGTTGGCCATCAAAGCTTACATAAACTCAACCTACACACCAACAGCAACAGTGTTATTCAAAGGAACTGTAATTGGTGATTCACTTGCTCCTACTGTTGTTCATTTTTCTTCAAGAGGTCCAAGCCAGGAAAGCCCTGGTATTCTAAAACCTGACATCATTGGACCTGGAGTGAACATTCTAGCTGCATGGGGTGTGTCTGTAGACAACAAAATCCCACCCTATGATATTGTTTCAGGCACTTCAATGTCTTGCCCTCACCTCAGTGGCATTGCTGCTTTGCTCAAAAGTTCACACCCTGATTGGTCTCCAGCTGCCATAAAGTCAGCAATTATGACCACTGCTAATACACACAACCTCGGAGGTGGGGCCATATTGGACCAAAGGCTTCTACCTGCTGACGTGTTTGCCACTGGTGCGGGCCATGTTAATCCTAACAAAGCAAATGATCCTGGGCTTGTTTATGATATCCAACCAGAAGATTACATTCCTTATTTGTGTGGTTTGGGTTACACAGACAGAGAAATTGCAATTCTTTTGCAGAGGAAAGTGAGATGCTCCAAGATAAAAAGCATACCACAAACACAACTCAATTATCCCTCATTTTCTATTATAATGGGAGACACTTCACAGTTCTACACCAGAACGTTGACAAATGTTGGACCTGCCAAATCAACATATACTGTGAAACTTGATGTGCCTTTGGCCTTAGGTATGGGCGTAAATCCTAGTCAGATAGCATTCACGAAGGTGAACCAGAAGATTACATACTCAGTGGAGTTTATCCCACAAATCAAAGAAAATAGAGGCAACCATACTTTTGCTCAGGGTTCTCTCACATGGGTATCTGACAAACACACTGTTAGGAGCCCCATATCTGTTATTTTCAAGTGA 2244 0.4452 MEKSKYGMNLVSLLGLILMLSFNPTSMAVEESQDLDNLLTYIVHVKKLEDGASLQSEELHNWYHSLLPETSNKERMVFSYRNVASGFAVKLTPEEAKALEEKVEIVSARPERTLSLHTTHTPSFLGLRQGQGLWNDSNLGKGVIIGVIDTGIFPFHPSFNDEGMPPPPAKWKGHCEFTGGRTCNNKLIGARNLLKNATEEPPFENFFHGTHTAAEAAGRFVKDASVFGQAKGTAAGMAPNAHIAMYKVCNDKVGCPESAMLAAMDIAIDDGVDVLSLSLGLGSLPFYDDPIAIGAFAAIQSGIFVSCSAANSGPGYSTLSNEAPWILTVGASTIDRKIAASAKLGNGAEYEGESLFQPKDFSPQLLPLVYAGQNGNQSSALCAPRSLKNIDVKGKVVVCDIGGGISGVVKGQEVLDAGGVAMILTNAQVVGFSTFAIAHVLPAVHVSYAAGLAIKAYINSTYTPTATVLFKGTVIGDSLAPTVVHFSSRGPSQESPGILKPDIIGPGVNILAAWGVSVDNKIPPYDIVSGTSMSCPHLSGIAALLKSSHPDWSPAAIKSAIMTTANTHNLGGGAILDQRLLPADVFATGAGHVNPNKANDPGLVYDIQPEDYIPYLCGLGYTDREIAILLQRKVRCSKIKSIPQTQLNYPSFSIIMGDTSQFYTRTLTNVGPAKSTYTVKLDVPLALGMGVNPSQIAFTKVNQKITYSVEFIPQIKENRGNHTFAQGSLTWVSDKHTVRSPISVIFK* 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02123 747 PRINTS Subtilisin serine protease family (S8) signature 140 159 IPR015500 -
Rops1g02123 747 PRINTS Subtilisin serine protease family (S8) signature 204 217 IPR015500 -
Rops1g02123 747 PRINTS Subtilisin serine protease family (S8) signature 529 545 IPR015500 -
Rops1g02123 747 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 41 744 IPR045051 -
Rops1g02123 747 Pfam Subtilase family 140 568 IPR000209 GO:0006508|GO:0008236
Rops1g02123 747 Pfam Peptidase inhibitor I9 40 117 IPR010259 -
Rops1g02123 747 Pfam PA domain 367 454 IPR003137 -
Rops1g02123 747 CDD PA_subtilisin_like 343 468 - -
Rops1g02123 747 Gene3D - 616 746 - -
Rops1g02123 747 FunFam subtilisin-like protease SBT1.5 335 475 - -
Rops1g02123 747 SUPERFAMILY Subtilisin-like 116 603 IPR036852 GO:0004252|GO:0006508
Rops1g02123 747 CDD Peptidases_S8_3 116 566 IPR034197 -
Rops1g02123 747 Gene3D Peptidase S8/S53 domain 142 612 IPR036852 GO:0004252|GO:0006508
Rops1g02123 747 Gene3D - 335 476 - -
Rops1g02123 747 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 145 156 IPR023827 -
Rops1g02123 747 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 117 IPR037045 -
Rops1g02123 747 ProSiteProfiles Serine proteases, subtilase domain profile. 124 599 - -
Rops1g02123 747 Pfam Fibronectin type-III domain 646 744 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02123 Rops-Chr1 42478664 42480907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g02123 17 747 Subtilisin-like Serine Gene Family AT1G04110 44.144 0.0 594
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02123 - - gmx:100783595 1234.94