Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops1g02097 | ATGAAGTCCTTCCATCTTCTCGTTTCTCTTTCTCTGTTTCTACTGGTTGCATTTCCTCAGATGGTTCGTGGAAATGCAGAGCTAAGAGCTTTGATGGACTTGAAATCCTCTCTGGACCCAGAGGGAAAGATCCTTAGCTCGTGGATCAGTGATGGTGACCAATGCAGTGGCTCTTTCGTTGGGATTGCATGCAACGAGCACAGGAAAGTGGCTAACATTTCCTTGCAGGGAAAGGGCCTTTCGGGTTGGCTCTCTCCAGCTCTGGCTGAACTCAAGTGCTTGTCAGGCTTATACTTGCATTACAACAATCTTTCTGGTGAGATACCACCACAGATTTCAAATCTCACTGATCTGGTTGATCTCTATCTCGATGTCAATAGTCTATCTGGAACCATCCCCCCAGAGCTTGGCAATATGGCTAGTCTCCAAGTACTCCAGTTGGGCGATAATCAGTTGGTGGGGAATATACCTACACAGATGGGTTCCTTGAAGCAGCTTAGCACTCTTGCTTTGCAATATAACAAGTTAACTGGTCAAATTCCTCTTAGCTTGGGGAACTTGGAGAGGCTAAGCAGGCTAAATTTGAGCTTCAACAACTTCAGTGGTGCGATTCCCGCAACATTAGCCCGTATTGCAAATTTGAAAGTTCTAGATATTCAAAACAATTCTCTATCAGGAATTGTTCCTTCTGCATTGAAGAGACTTGGGGAAGGATTCCAAGGTGCAAACAACCCAGGTTTATGTGGAGTTATGTTTTCTACATTGAGAGCTTGCAACAAAGATCAAGATTTAAAGGTTAACCATATTGATACCTCAGATCAAGACCAACCCAAAATGAGTAATCCTGCAAAGGCTCTTCCGGAGCCTGCAAATATTCAGCTGCATTGTAATCAGACCCATTGCTCAAAACCAAGAAGGTTTCCTCAAACTGTCATCACAGCAGGTGTCATAACTATCACTCTCACATTCATAGGTGCTGGATTTTTCACATTTGTCAAATACCGCCGTCAAAAGCAGAGGATTACATCAAATTCTTCTGAAGGGAAACTTAGTCCTGACCAGCCTAAAGAGTTCTACAGAAAAAGCCCATCTGCACTTGTTAATCTTGAGTATTATAATGGATGGTATCCATTATCTGATGATCAAAATGCTGGTGGATTATCCAATGAATATTTAAACCAATTCAGGTTTAATGTAGATGAGGTTGAATCTGCAACACAGTACCTTTCCGAAGCCAATTTATTGGGTAAGAGCAAATTCTCAGCAGTTTATAAAGGAGTTCTCAGAGATGGTTCTCTTGTGGCTATTAGAAGCATTAACGTGACATGCTGCAAAGCCGAGGAAGCTGAATTTGGAAAGGGGTTAACCTTATTAACCTCTCTGAGACATGAAAACCTTGTGAGGCTAAGAGGTTTCTGTTGCTCAACTAGTAGAGGTGAATGTTTCCTTATCTATGACTTTGCCACCATGGGTAACCTGTCTCAATATCTTGACATAGAAGATGGAACTGGCCATGTGCTTGACTGGTCCAAGAGGGTTTCTATCATCAAGGGCATTGCAAAAGGCATTGGATATCTGCACAGCAATGAAGCTAGCAAACCTACAATAGTACATCAGAACATTTCTGTGGAAAATGTTCTCCTTGATCATCAGTTTAAGCCATTGATCATGGATGCTGGACTCCCTAAGCTTCTTGCGGATGATGTTGTTTTCTCTGCTCTAAAAGTAAGTGCTGCCATGGGATATCTTGCTCCTGAATACATTACTACTGGACGATTTACTGAGAAGAGTGACATATACGCATTTGGGGTTATTGTTCTTCAAGTTCTATCTGGCAAGAAGGCAATAGGTGGTTCAATACGTATGGCATTTGAGTCTTTAAGATTTGATGATTTTATTGACACAAATCTTAGGGGAAGATATTCTAAATCTGAAGCAGAGACGCTTTCAAAGCTTGCAATGCTATGTATCGATGAGCTTCCTGACCAAAGACCAACTACGATGGAAGTGATTCAGGAGCTAAGCGTGCTTGTTCATGATGATCTACTACTATCTATTGGCATTAAGAGAGGTTGA | 2076 | 0.4181 | MKSFHLLVSLSLFLLVAFPQMVRGNAELRALMDLKSSLDPEGKILSSWISDGDQCSGSFVGIACNEHRKVANISLQGKGLSGWLSPALAELKCLSGLYLHYNNLSGEIPPQISNLTDLVDLYLDVNSLSGTIPPELGNMASLQVLQLGDNQLVGNIPTQMGSLKQLSTLALQYNKLTGQIPLSLGNLERLSRLNLSFNNFSGAIPATLARIANLKVLDIQNNSLSGIVPSALKRLGEGFQGANNPGLCGVMFSTLRACNKDQDLKVNHIDTSDQDQPKMSNPAKALPEPANIQLHCNQTHCSKPRRFPQTVITAGVITITLTFIGAGFFTFVKYRRQKQRITSNSSEGKLSPDQPKEFYRKSPSALVNLEYYNGWYPLSDDQNAGGLSNEYLNQFRFNVDEVESATQYLSEANLLGKSKFSAVYKGVLRDGSLVAIRSINVTCCKAEEAEFGKGLTLLTSLRHENLVRLRGFCCSTSRGECFLIYDFATMGNLSQYLDIEDGTGHVLDWSKRVSIIKGIAKGIGYLHSNEASKPTIVHQNISVENVLLDHQFKPLIMDAGLPKLLADDVVFSALKVSAAMGYLAPEYITTGRFTEKSDIYAFGVIVLQVLSGKKAIGGSIRMAFESLRFDDFIDTNLRGRYSKSEAETLSKLAMLCIDELPDQRPTTMEVIQELSVLVHDDLLLSIGIKRG* | 692 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops1g02097 | 691 | SUPERFAMILY | L domain-like | 27 | 233 | - | - | |
Rops1g02097 | 691 | SMART | LRR_typ_2 | 187 | 210 | IPR003591 | - | |
Rops1g02097 | 691 | SMART | LRR_typ_2 | 91 | 115 | IPR003591 | - | |
Rops1g02097 | 691 | SMART | LRR_typ_2 | 139 | 163 | IPR003591 | - | |
Rops1g02097 | 691 | SMART | LRR_typ_2 | 211 | 234 | IPR003591 | - | |
Rops1g02097 | 691 | Gene3D | Ribonuclease Inhibitor | 175 | 244 | IPR032675 | - | |
Rops1g02097 | 691 | SUPERFAMILY | Protein kinase-like (PK-like) | 387 | 680 | IPR011009 | - | |
Rops1g02097 | 691 | FunFam | Protein NSP-INTERACTING KINASE 2 | 380 | 487 | - | - | |
Rops1g02097 | 691 | Gene3D | Transferase(Phosphotransferase) domain 1 | 489 | 681 | - | - | |
Rops1g02097 | 691 | FunFam | Protein NSP-INTERACTING KINASE 2 | 488 | 678 | - | - | |
Rops1g02097 | 691 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED | 290 | 675 | - | - | |
Rops1g02097 | 691 | Pfam | Leucine rich repeat N-terminal domain | 25 | 65 | IPR013210 | - | |
Rops1g02097 | 691 | Gene3D | Ribonuclease Inhibitor | 24 | 174 | IPR032675 | - | |
Rops1g02097 | 691 | ProSiteProfiles | Protein kinase domain profile. | 409 | 682 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops1g02097 | 691 | Pfam | Protein tyrosine and serine/threonine kinase | 413 | 674 | IPR001245 | GO:0004672|GO:0006468 | |
Rops1g02097 | 691 | FunFam | Protein NSP-INTERACTING KINASE 2 | 24 | 173 | - | - | |
Rops1g02097 | 691 | Pfam | Leucine Rich Repeat | 213 | 235 | IPR001611 | GO:0005515 | |
Rops1g02097 | 691 | Gene3D | Phosphorylase Kinase; domain 1 | 380 | 487 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops1g02097 | Rops-Chr1 | 42028553 | 42031700 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops1g02097 | 6 | 522 | Miscellaneous Gene Families | AT4G22730 | 59.168 | 0.0 | 591 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-IV | Rops1g02097 | PK_Tyr_Ser-Thr | 2.4e-36 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops1g02097 | - | - | gmx:100777169 | 1123.61 |