Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02076 ATGGTTGGTCTCCACTCCATCAATTCAGTTCCTGATTGGCTTCTCATTCTTAAGGAGCAGAAGTTTTTCACTCGTTGTTTGATTCATGGCTCTGTAAAGAAGAACGAAAAGAATATTTTTTGCTTGGATTGTTGCACGAGCATTTGCCCCCATTGTGTGCCCCTTCATCACTCTCACGTCCTTTTGCAGATAAGAAGGTACATGTACAATGAGGTATTACGGCTTGGTGATGCTCAGAGATTGTTGAATTGTTCCCTTGTTCAACCATACACAACAAATAGTGCCAAGGTTGTATTTCTGAAACAAAGGTCAGCCTCTCGCTCTCTTAGAGGCTCTGGCAACCTTTGCATCATATGTGACCGTAGCCTCCAAAATCCATACATCTTCTGCTCTGTGTCATGCAAGCAGGTGCATCATCTTCTAATAATTACCAAAAGCTCAACCATAAAAGACATTTGTAACAAGAACCTCCAAGAAATTGATGATAGCCAAATCACACCTGATTCCGTGCTAGACTCACCCACGTCGACATCGTTGTGCACTATGTCTGGGTCAACAAGTACTATTAGTGGGGATGTGGCAGAGAGCTTGAAGAGCCCAACAAATTGTACTGCCCATGCCGGTGCCACTTCTGAGCTTGTCAAAAAGAAACGTAGCAGTGTTAATCTGGTTCCACGGATTTGGTACACACCTGCAATGGAGCTAGGCACCACGGTAAACCGGCGAAAAGGTGTCCCTCACCGATCACCATTTTATTGA 759 0.4427 MVGLHSINSVPDWLLILKEQKFFTRCLIHGSVKKNEKNIFCLDCCTSICPHCVPLHHSHVLLQIRRYMYNEVLRLGDAQRLLNCSLVQPYTTNSAKVVFLKQRSASRSLRGSGNLCIICDRSLQNPYIFCSVSCKQVHHLLIITKSSTIKDICNKNLQEIDDSQITPDSVLDSPTSTSLCTMSGSTSTISGDVAESLKSPTNCTAHAGATSELVKKKRSSVNLVPRIWYTPAMELGTTVNRRKGVPHRSPFY* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02076 252 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 9 251 - -
Rops1g02076 252 Pfam PLATZ transcription factor 65 135 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02076 Rops-Chr1 41716539 41718102 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Rops1g02076 PLATZ 4.9e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02076 - - gmx:100806286 343.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g02076 1 41716539 41718102 Rops1g02076 1 41716539 41718102 ECH